gmc-mgs-pipeline

by: R.Gacesa (UMCG, 2023)

Groningen Microbiome Centre MGS data analysis pipeline (beta, work in progress, more info coming "soon")

INSTALLATION.md : basic instructions on software installation
2024_05_microbiome_analysis_pipeline_tutorial.pptx : a basic description of the pipeline and a tutorial

Name		Name	Last commit message	Last commit date
Latest commit History 8 Commits
adapters		adapters
conda_recipies		conda_recipies
test_data		test_data
test_data_babyrun		test_data_babyrun
utils		utils
2024_05_microbiome_analysis_pipeline_tutorial.pptx		2024_05_microbiome_analysis_pipeline_tutorial.pptx
GMH_pipe.cfg		GMH_pipe.cfg
GMH_pipe.py		GMH_pipe.py
GMH_pipe_MAGs.cfg		GMH_pipe_MAGs.cfg
GMH_pipe_bb34.cfg		GMH_pipe_bb34.cfg
GMH_pipe_mp41_viruses.cfg		GMH_pipe_mp41_viruses.cfg
INSTALLATION.md		INSTALLATION.md
LICENSE		LICENSE
README.md		README.md

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