GUDHI 3.10.0rc2 release #32

Workflow file for this run

.github/workflows/pip-packaging-linux.yml at e4feb7b

	name: pip packaging linux

	on:
	release:
	types: [published]

	jobs:
	build:
	name: build pip wheel
	runs-on: ubuntu-latest
	# cf. https://github.com/GUDHI/gudhi-deploy/blob/main/Dockerfile_for_pip
	container: gudhi/pip_for_gudhi:2024.06.02
	steps:
	# Should use actions/checkout@v4, but requires node20, not available for quay.io/pypa/manylinux2014_x86_64
	- uses: actions/checkout@v3
	with:
	submodules: true
	# Python 3.8 specific case where NumPy 2.x will not be supported
	# numpy~=1.21.4 means any numpy=1.21., but also numpy>=1.21.4 (numpy~=1.21 do not work as it means any numpy==1.)
	- name: Build wheel for Python 3.8
	run: \|
	rm -rf src/python/gudhi/*.cpp
	mkdir build_38
	cd build_38
	cmake -DCMAKE_BUILD_TYPE=Release -DPYTHON_EXECUTABLE=$PYTHON38/bin/python ..
	cd src/python
	$PYTHON38/bin/python -m build -n -w
	auditwheel repair dist/*.whl
	- name: Install and test wheel for Python 3.8
	run: \|
	$PYTHON38/bin/python -m pip install --user pytest build_38/src/python/dist/*.whl
	$PYTHON38/bin/python -m pip install numpy --upgrade
	$PYTHON38/bin/python -c "import gudhi; print(gudhi.__version__)"
	$PYTHON38/bin/python -m pytest -v src/python/test/test_alpha_complex.py
	$PYTHON38/bin/python -m pytest -v src/python/test/test_bottleneck_distance.py
	$PYTHON38/bin/python -m pytest -v src/python/test/test_cubical_complex.py
	$PYTHON38/bin/python -m pytest -v src/python/test/test_rips_complex.py
	- name: Build wheel for Python 3.9
	run: \|
	rm -rf src/python/gudhi/*.cpp
	mkdir build_39
	cd build_39
	cmake -DCMAKE_BUILD_TYPE=Release -DPYTHON_EXECUTABLE=$PYTHON39/bin/python ..
	cd src/python
	$PYTHON39/bin/python -m build -n -w
	auditwheel repair dist/*.whl
	# For python >=3.9, numpy >= 2.0 is used to package and test ABI compatibility with numpy 1.X
	# cf. https://numpy.org/doc/stable/dev/depending_on_numpy.html#numpy-2-0-specific-advice
	# gudhi requires numpy >= 1.15.0, but minimal numpy version for python 3.9 is 1.19.3 for instance
	# numpy~=1.19.3 means any numpy=1.19., but also numpy>=1.19.3 (numpy~=1.19 do not work as it means any numpy==1.)
	- name: Install and test wheel for Python 3.9
	run: \|
	$PYTHON39/bin/python -m pip install --user pytest build_39/src/python/dist/*.whl
	$PYTHON39/bin/python -m pip install numpy~=1.19.3
	$PYTHON39/bin/python -c "import gudhi; print(gudhi.__version__)"
	$PYTHON39/bin/python -m pytest -v src/python/test/test_alpha_complex.py
	$PYTHON39/bin/python -m pytest -v src/python/test/test_bottleneck_distance.py
	$PYTHON39/bin/python -m pytest -v src/python/test/test_cubical_complex.py
	$PYTHON39/bin/python -m pytest -v src/python/test/test_rips_complex.py
	- name: Build wheel for Python 3.10
	run: \|
	rm -rf src/python/gudhi/*.cpp
	mkdir build_310
	cd build_310
	cmake -DCMAKE_BUILD_TYPE=Release -DPYTHON_EXECUTABLE=$PYTHON310/bin/python ..
	cd src/python
	$PYTHON310/bin/python -m build -n -w
	auditwheel repair dist/*.whl
	- name: Install and test wheel for Python 3.10
	run: \|
	$PYTHON310/bin/python -m pip install --user pytest build_310/src/python/dist/*.whl
	$PYTHON310/bin/python -m pip install numpy~=1.21.6
	$PYTHON310/bin/python -c "import gudhi; print(gudhi.__version__)"
	$PYTHON310/bin/python -m pytest -v src/python/test/test_alpha_complex.py
	$PYTHON310/bin/python -m pytest -v src/python/test/test_bottleneck_distance.py
	$PYTHON310/bin/python -m pytest -v src/python/test/test_cubical_complex.py
	$PYTHON310/bin/python -m pytest -v src/python/test/test_rips_complex.py
	- name: Build wheel for Python 3.11
	run: \|
	rm -rf src/python/gudhi/*.cpp
	mkdir build_311
	cd build_311
	cmake -DCMAKE_BUILD_TYPE=Release -DPYTHON_EXECUTABLE=$PYTHON311/bin/python ..
	cd src/python
	$PYTHON311/bin/python -m build -n -w
	auditwheel repair dist/*.whl
	- name: Install and test wheel for Python 3.11
	run: \|
	$PYTHON311/bin/python -m pip install --user pytest build_311/src/python/dist/*.whl
	$PYTHON311/bin/python -m pip install numpy~=1.23.2
	$PYTHON311/bin/python -c "import gudhi; print(gudhi.__version__)"
	$PYTHON311/bin/python -m pytest -v src/python/test/test_alpha_complex.py
	$PYTHON311/bin/python -m pytest -v src/python/test/test_bottleneck_distance.py
	$PYTHON311/bin/python -m pytest -v src/python/test/test_cubical_complex.py
	$PYTHON311/bin/python -m pytest -v src/python/test/test_rips_complex.py
	- name: Build wheel for Python 3.12
	run: \|
	rm -rf src/python/gudhi/*.cpp
	mkdir build_312
	cd build_312
	cmake -DCMAKE_BUILD_TYPE=Release -DPYTHON_EXECUTABLE=$PYTHON312/bin/python ..
	cd src/python
	$PYTHON312/bin/python -m build -n -w
	auditwheel repair dist/*.whl
	- name: Install and test wheel for Python 3.12
	run: \|
	$PYTHON312/bin/python -m pip install --user pytest build_312/src/python/dist/*.whl
	$PYTHON312/bin/python -m pip install numpy~=1.26.0
	$PYTHON312/bin/python -c "import gudhi; print(gudhi.__version__)"
	$PYTHON312/bin/python -m pytest -v src/python/test/test_alpha_complex.py
	$PYTHON312/bin/python -m pytest -v src/python/test/test_bottleneck_distance.py
	$PYTHON312/bin/python -m pytest -v src/python/test/test_cubical_complex.py
	$PYTHON312/bin/python -m pytest -v src/python/test/test_rips_complex.py
	- name: Publish on PyPi
	env:
	TWINE_USERNAME: __token__
	TWINE_PASSWORD: ${{ secrets.PYPI_PASSWORD }}
	run: \|
	$PYTHON38/bin/python -m twine upload build_38/src/python/wheelhouse/*.whl
	$PYTHON38/bin/python -m twine upload build_39/src/python/wheelhouse/*.whl
	$PYTHON38/bin/python -m twine upload build_310/src/python/wheelhouse/*.whl
	$PYTHON38/bin/python -m twine upload build_311/src/python/wheelhouse/*.whl
	$PYTHON38/bin/python -m twine upload build_312/src/python/wheelhouse/*.whl

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GUDHI 3.10.0rc2 release #32

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GUDHI 3.10.0rc2 release #32

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