Wrap GMT's standard data type GMT_CUBE for cubes #4054
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| # Run performance benchmarks | |
| # | |
| # Continuous benchmarking using pytest-codspeed. Measures the execution speed of tests | |
| # marked with @pytest.mark.benchmark decorator. | |
| name: Benchmarks | |
| on: | |
| # Run on pushes to the main branch | |
| push: | |
| branches: [ main ] | |
| paths: | |
| - 'pygmt/**/*.py' | |
| - '.github/workflows/benchmarks.yml' | |
| # Run in PRs but only if the PR has the 'run/benchmark' label | |
| pull_request: | |
| types: [ opened, reopened, labeled, synchronize ] | |
| # 'workflow_dispatch' allows CodSpeed to trigger backtest performance analysis | |
| # in order to generate initial data. | |
| workflow_dispatch: | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: ${{ github.ref != 'refs/heads/main' }} | |
| jobs: | |
| benchmarks: | |
| runs-on: ubuntu-22.04 | |
| if: github.repository == 'GenericMappingTools/pygmt' && (github.event_name != 'pull_request' || contains(github.event.pull_request.labels.*.name, 'run/benchmark')) | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| # Checkout current git repository | |
| - name: Checkout | |
| uses: actions/checkout@v4.1.7 | |
| with: | |
| # fetch all history so that setuptools-scm works | |
| fetch-depth: 0 | |
| - name: Get current week number of year | |
| id: date | |
| run: echo "date=$(date +%Y-W%W)" >> $GITHUB_OUTPUT # e.g., 2024-W19 | |
| # Install Micromamba with conda-forge dependencies | |
| - name: Setup Micromamba | |
| uses: mamba-org/setup-micromamba@v1.9.0 | |
| with: | |
| environment-name: pygmt | |
| condarc: | | |
| channels: | |
| - conda-forge | |
| - nodefaults | |
| cache-downloads: false | |
| cache-environment: true | |
| # environment cache is persistent for one week. | |
| cache-environment-key: micromamba-environment-${{ steps.date.outputs.date }} | |
| create-args: >- | |
| gmt=6.5.0 | |
| python=3.12 | |
| numpy | |
| pandas | |
| xarray | |
| netCDF4 | |
| packaging | |
| geopandas | |
| pyarrow | |
| pytest | |
| pytest-codspeed | |
| pytest-mpl | |
| # Download cached remote files (artifacts) from GitHub | |
| - name: Download remote data from GitHub | |
| run: | | |
| # Download cached files to ~/.gmt directory and list them | |
| gh run download --name gmt-cache --dir ~/.gmt/ | |
| # Change modification times of the two files, so GMT won't refresh it | |
| touch ~/.gmt/gmt_data_server.txt ~/.gmt/gmt_hash_server.txt | |
| ls -lhR ~/.gmt | |
| env: | |
| GH_TOKEN: ${{ github.token }} | |
| # Install the package that we want to test | |
| - name: Install the package | |
| run: make install | |
| # Run the benchmark tests | |
| - name: Run benchmarks | |
| uses: CodSpeedHQ/action@v3.0.0 | |
| with: | |
| # 'bash -el -c' is needed to use the custom shell. | |
| # See https://github.com/CodSpeedHQ/action/issues/65. | |
| run: bash -el -c "python -c \"import pygmt; pygmt.show_versions()\"; PYGMT_USE_EXTERNAL_DISPLAY=false python -m pytest -r P --pyargs pygmt --codspeed" |