Doctests #78
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| # Run all doctests on Linux/macOS/Windows | |
| # | |
| # This workflow runs all PyGMT doctests. It is scheduled to run weekly every | |
| # Sunday. | |
| # | |
| name: Doctests | |
| on: | |
| # push: | |
| # branches: [ main ] | |
| # pull_request: | |
| # Schedule weekly tests on Sunday | |
| schedule: | |
| - cron: '0 0 * * 0' | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: ${{ github.ref != 'refs/heads/main' }} | |
| jobs: | |
| test: | |
| name: ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| if: github.repository == 'GenericMappingTools/pygmt' | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, macos-latest, windows-latest] | |
| timeout-minutes: 30 | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| # Checkout current git repository | |
| - name: Checkout | |
| uses: actions/checkout@v4.1.1 | |
| with: | |
| # fetch all history so that setuptools-scm works | |
| fetch-depth: 0 | |
| # Install Micromamba with conda-forge dependencies | |
| - name: Setup Micromamba | |
| uses: mamba-org/setup-micromamba@v1.8.0 | |
| with: | |
| environment-name: pygmt | |
| condarc: | | |
| channels: | |
| - conda-forge | |
| - nodefaults | |
| create-args: >- | |
| python=3.12 | |
| gmt=6.5.0 | |
| numpy | |
| pandas | |
| xarray | |
| netCDF4 | |
| packaging | |
| contextily | |
| geopandas | |
| ipython | |
| pyarrow | |
| rioxarray | |
| build | |
| make | |
| pip | |
| pytest | |
| pytest-doctestplus | |
| pytest-mpl | |
| # Download cached remote files (artifacts) from GitHub | |
| - name: Download remote data from GitHub | |
| uses: dawidd6/action-download-artifact@v3.0.0 | |
| with: | |
| workflow: cache_data.yaml | |
| workflow_conclusion: success | |
| name: gmt-cache | |
| path: .gmt | |
| # Move downloaded files to ~/.gmt directory and list them | |
| - name: Move and list downloaded remote files | |
| run: | | |
| mkdir -p ~/.gmt | |
| mv .gmt/* ~/.gmt | |
| # Change modification times of the two files, so GMT won't refresh it | |
| touch ~/.gmt/gmt_data_server.txt ~/.gmt/gmt_hash_server.txt | |
| ls -lhR ~/.gmt | |
| # Install the package that we want to test | |
| - name: Install the package | |
| run: make install | |
| # Run the doctests | |
| - name: Run doctests | |
| run: make doctest PYTEST_EXTRA="-r P" |