Releases: Gregor-Mendel-Institute/SNPmatch
Releases · Gregor-Mendel-Institute/SNPmatch
Version 5.0.1
Class function for HMM on genotyping an F2 cross with known parental genotypes. Fixed few bugs!
Version 5.0.0
Package is now py3 compatible.
- Have adopted few functions from pyGWAS.
- Few updated function in parsers.py
- Updated HMM function to genotype cross. Changed the output file format to load into Rqtl.
- Conda package list update along with container.
Version 4.0.0
Many changes.. 1. Can input gzipped vcf as input file. 2. functions for snp genotype 3. class function for snpmatch 4. docker container
Version 3.0.1
Additional functions for non-thaliana genomes.
Version 2.5.0
Implemented HMM for genotype cross.
Version 2.2.0
Fixed problems during parsing chromosome names and few other bugs.
Version 2.0.0
Few minor bugs. Added a new module parsers.
Version 1.9.2
migrated to scikit-allel! better readme
Version 1.9.0
v1.9.0 version up
Version 1.8.0
minor changes, cleaned output filenames