Popular repositories Loading

1. AlignerBoost AlignerBoost Public

   AlignerBoost is a generalized software toolkit for boosting Next-Gen sequencing mapping precision using a Bayesian based mapping quality framework

   Java 11 2

2. HmmUFOtu HmmUFOtu Public

   An HMM and Phylogenetic Placement based Ultra-Fast Taxonomy Assignment Tool for 16S sequencing

   C++ 10 9

3. MSGseqTK MSGseqTK Public

   A Metagenomics Shotgun Sequencing Toolkit for NGS read mapping and cleaning based on a novel incremental and parallel FMD-index algorithm

   C++ 1

4. EAGenomeAssembly EAGenomeAssembly Public

   Breaking out the assembly pipeline into its own repo (mapping files are still located in ClubGrice/mapping_files until publishable)

   Shell

5. DFUStrainsWGS DFUStrainsWGS Public

   This repo contains scripts related to the whole genome sequencing of >200 isolates of S. aureus from people with diabetic foot ulcers (DFU100 project)

   Shell

6. IowaWound IowaWound Public

   Iowa Wound Pain analyses 2020

   R