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Fix some potential segfaults (#30) #19

Fix some potential segfaults (#30)

Fix some potential segfaults (#30) #19

Workflow file for this run

name: Test HDFGroup/hdf5-develop
# Controls when the action will run.
on:
# Triggers the workflow on push or pull request events for the develop branch
push:
branches: [ develop ]
# Allows you to run this workflow manually from the Actions tab
workflow_dispatch:
jobs:
# This workflow contains a single job called "build"
build:
# The type of runner that the job will run on
runs-on: ubuntu-latest
steps:
- name: Checkout vol-cache
uses: actions/checkout@v4.1.1
- name: Checkout HDF5
uses: actions/checkout@v4.1.1
with:
repository: HDFGroup/hdf5
path: hdf5
- name: Checkout Argobots
uses: actions/checkout@v4.1.1
with:
repository: pmodels/argobots
path: abt
- name: Checkout vol-async
uses: actions/checkout@v4.1.1
with:
repository: hpc-io/vol-async
path: vol-async
- name: Install dependencies
run: sudo apt-get install ninja-build automake autoconf libtool libtool-bin libopenmpi-dev
- name: Install HDF5
run: |
cmake --version
mkdir -p hdf5/build
cd hdf5/build
cmake -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=/usr/local -DHDF5_ENABLE_PARALLEL:BOOL=ON -DHDF5_ENABLE_THREADSAFE:BOOL=ON -DALLOW_UNSUPPORTED:BOOL=ON ..
sudo make -j2 install
cd ..
git rev-parse HEAD > git.txt
- name: Install Argobots
run: |
cd abt
./autogen.sh
./configure --prefix=/usr/local
make -j2
sudo make -j2 install
cd ..
- name: Install vol-async
env:
CXX: mpic++
CC: mpicc
run: |
mkdir vol-async/build
cd vol-async/build
ls ..
cmake .. -DCMAKE_INSTALL_PREFIX=/usr/local
ls
cat Makefile
ls /usr/local/lib
sudo make -j2 install
cd ..
- name: Install vol-cache
env:
CXX: mpic++
CC: mpicc
HDF5_PLUGIN_PATH: /usr/local/lib
HDF5_VOL_CONNECTOR: cache_ext config=cache_1.cfg\;under_vol=0\;under_info={}\;
ABT_DIR: /usr/local/
HDF5_VOL_DIR: /usr/local/
HDF5_ROOT: /usr/local/
LD_PRELOAD: /usr/local/lib/libabt.so
LD_LIBRARY_PATH: /usr/local/lib:$LD_LIBRARY_PATH
run: |
mkdir build
cd build
cmake ..
sudo make -j2 install
ls /usr/local/lib
ctest --output-on-failure
- name: Upload
uses: actions/upload-artifact@v4
with:
name: git.txt
path: ${{ runner.workspace }}/vol-cache/hdf5/git.txt