This repository is meant to be used in order to store data and code for the group porject food-friends/fights of the CSH Winterschool.
All source code used to generate the results and figures in the paper are in
the model_src folder. The model itself is contained in models_main.py. In the future, results generated by the code are saved in Output, and figures in Figs.
You can download a copy of all the files in this repository by cloning the git repository:
git clone https://github.com/HeiJuli/foodfriends.git
You'll need a working Python environment to run the code.
The recommended way to set up your environment is through the
Anaconda Python distribution which
provides the conda package manager.
Anaconda can be installed in your user directory and does not interfere with
the system Python installation.
The required dependencies are specified in the file environment_foodfriends.yml, as well as requirements_foodfriends.txt .
We use conda virtual environments to manage the project dependencies in
isolation.
Thus, you can install our dependencies without causing conflicts with your
setup (even with different Python versions).
Run the following command in the repository folder (where environment_foodfriends.yml
is located) to create a separate environment and install all required
dependencies in it:
conda env create
Before running any code you must activate the conda environment:
source activate ENVIRONMENT_NAME
or, if you're on Windows:
activate ENVIRONMENT_NAME
This will enable the environment for your current terminal session. Any subsequent commands will use software that is installed in the environment.
All source code is made available under a BSD 3-clause license. You can freely
use and modify the code, without warranty, so long as you provide attribution
to the authors. See LICENSE.md for the full license text.
The manuscript text is not open source. The authors reserve the rights to the article content, which is currently submitted for publication in Nature Human Behaviour.