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utils_optical_flow_test_midStab.py
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utils_optical_flow_test_midStab.py
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import os
import pickle
import numpy as np
import pandas as pd
import random
import torch
import math
from torch.autograd import Variable
from helper import *
class DataLoader():
def __init__(self,f_prefix, batch_size=4, seq_length=10, num_of_validation = 0, forcePreProcess=False, infer=False, generate = False):
'''
Initialiser function for the DataLoader class
params:
batch_size : Size of the mini-batch
seq_length : Sequence length to be considered
num_of_validation : number of validation dataset will be used
infer : flag for test mode
generate : flag for data generation mode
forcePreProcess : Flag to forcefully preprocess the data again from csv files
'''
# test_files_path = 'data/test/IRVLab/'
# train_files_path = 'data/train/IRVLab/'
# for (_, _, filenames) in os.walk(test_files_path):
# base_test_dataset = filenames
# break
# for (_, _, filenames) in os.walk(train_files_path):
# base_train_dataset = filenames
# base test files
base_test_dataset= [ '/mnt/data1/vdd_optical_flow_labels/test/IRVLab/pool_swimmer_004_A.txt'#pool_flipper_001_A.txt'#, '/data/test/IRVLab/pool_flipper_003_A_0009.txt'#/data/test/biwi/biwi_eth.txt',
# '/data/test/crowds/crowds_zara01.txt',
# '/data/test/crowds/uni_examples.txt',
# '/data/test/stanford/coupa_0.txt',
# '/data/test/stanford/coupa_1.txt', '/data/test/stanford/gates_2.txt','/data/test/stanford/hyang_0.txt','/data/test/stanford/hyang_1.txt','/data/test/stanford/hyang_3.txt','/data/test/stanford/hyang_8.txt',
# '/data/test/stanford/little_0.txt','/data/test/stanford/little_1.txt','/data/test/stanford/little_2.txt','/data/test/stanford/little_3.txt','/data/test/stanford/nexus_5.txt','/data/test/stanford/nexus_6.txt',
# '/data/test/stanford/quad_0.txt','/data/test/stanford/quad_1.txt','/data/test/stanford/quad_2.txt','/data/test/stanford/quad_3.txt'
]
#base train files
base_train_dataset = ['/mnt/data1/vdd_optical_flow_labels/test/IRVLab/pool_swimmer_001_A.txt'#pool_flipper_003_A_0001.txt'#, '/data/test/IRVLab/pool_flipper_003_A_0004.txt'#/data/train/biwi/biwi_hotel.txt',
#'/data/train/crowds/arxiepiskopi1.txt','/data/train/crowds/crowds_zara02.txt',
#'/data/train/crowds/crowds_zara03.txt','/data/train/crowds/students001.txt','/data/train/crowds/students003.txt',
#'/data/train/mot/PETS09-S2L1.txt',
#'/data/train/stanford/bookstore_0.txt','/data/train/stanford/bookstore_1.txt','/data/train/stanford/bookstore_2.txt','/data/train/stanford/bookstore_3.txt','/data/train/stanford/coupa_3.txt','/data/train/stanford/deathCircle_0.txt','/data/train/stanford/deathCircle_1.txt','/data/train/stanford/deathCircle_2.txt','/data/train/stanford/deathCircle_3.txt',
#'/data/train/stanford/deathCircle_4.txt','/data/train/stanford/gates_0.txt','/data/train/stanford/gates_1.txt','/data/train/stanford/gates_3.txt','/data/train/stanford/gates_4.txt','/data/train/stanford/gates_5.txt','/data/train/stanford/gates_6.txt','/data/train/stanford/gates_7.txt','/data/train/stanford/gates_8.txt','/data/train/stanford/hyang_4.txt',
#'/data/train/stanford/hyang_5.txt','/data/train/stanford/hyang_6.txt','/data/train/stanford/hyang_9.txt','/data/train/stanford/nexus_0.txt','/data/train/stanford/nexus_1.txt','/data/train/stanford/nexus_2.txt','/data/train/stanford/nexus_3.txt','/data/train/stanford/nexus_4.txt','/data/train/stanford/nexus_7.txt','/data/train/stanford/nexus_8.txt','/data/train/stanford/nexus_9.txt'
]
# dimensions of each file set
self.dataset_dimensions = {'IRVLab':[320,240]}
self.obs_length = 5
# List of data directories where raw data resides
self.base_train_path = '/mnt/data1/vdd_optical_flow_labels/train/'
self.base_test_path = '/mnt/data1/vdd_optical_flow_labels/test/'
self.base_validation_path = '/mnt/data1/vdd_optical_flow_labels/valid/'
# check infer flag, if true choose test directory as base directory
if infer is False:
self.base_data_dirs = base_train_dataset
else:
self.base_data_dirs = base_test_dataset
# get all files using python os and base directories
self.train_dataset = self.get_dataset_path(self.base_train_path, f_prefix)
self.test_dataset = self.get_dataset_path(self.base_test_path, f_prefix)
self.validation_dataset = self.get_dataset_path(self.base_validation_path, f_prefix)
# if generate mode, use directly train base files
if generate:
self.train_dataset = [os.path.join(f_prefix, dataset[1:]) for dataset in base_train_dataset]
#request of use of validation dataset
if num_of_validation>0:
self.additional_validation = True
else:
self.additional_validation = False
# check validation dataset availibility and clip the reuqested number if it is bigger than available validation dataset
if self.additional_validation:
if len(self.validation_dataset) == 0:
print("There is no validation dataset.Aborted.")
self.additional_validation = False
else:
num_of_validation = np.clip(num_of_validation, 0, len(self.validation_dataset))
self.validation_dataset = random.sample(self.validation_dataset, num_of_validation)
# if not infer mode, use train dataset
if infer is False:
self.data_dirs = self.train_dataset
else:
# use validation dataset
if self.additional_validation:
self.data_dirs = self.validation_dataset
# use test dataset
else:
self.data_dirs = self.test_dataset
self.infer = infer
self.generate = generate
# Number of datasets
self.numDatasets = len(self.data_dirs)
# array for keepinng target ped ids for each sequence
self.target_ids = []
# Data directory where the pre-processed pickle file resides
self.train_data_dir = os.path.join(f_prefix, self.base_train_path)
self.test_data_dir = os.path.join(f_prefix, self.base_test_path)
self.val_data_dir = os.path.join(f_prefix, self.base_validation_path)
# Store the arguments
self.batch_size = batch_size
self.seq_length = seq_length
self.orig_seq_lenght = seq_length
# Validation arguments
self.val_fraction = 0
# Define the path in which the process data would be stored
self.data_file_tr = os.path.join(self.train_data_dir, "trajectories_train.cpkl")
self.data_file_te = os.path.join(self.base_test_path, "trajectories_test.cpkl")
self.data_file_vl = os.path.join(self.val_data_dir, "trajectories_val.cpkl")
# for creating a dict key: folder names, values: files in this folder
self.create_folder_file_dict()
if self.additional_validation:
# If the file doesn't exist or forcePreProcess is true
if not(os.path.exists(self.data_file_vl)) or forcePreProcess:
print("Creating pre-processed validation data from raw data")
# Preprocess the data from the csv files of the datasets
# Note that this data is processed in frames
self.frame_preprocess(self.validation_dataset, self.data_file_vl, self.additional_validation)
if self.infer:
# if infer mode, and no additional files -> test preprocessing
if not self.additional_validation:
if not(os.path.exists(self.data_file_te)) or forcePreProcess:
print("Creating pre-processed test data from raw data")
# Preprocess the data from the csv files of the datasets
# Note that this data is processed in frames
print("Working on directory: ", self.data_file_te)
self.frame_preprocess(self.data_dirs, self.data_file_te)
# if infer mode, and there are additional validation files -> validation dataset visualization
else:
print("Validation visualization file will be created")
# if not infer mode
else:
# If the file doesn't exist or forcePreProcess is true -> training pre-process
if not(os.path.exists(self.data_file_tr)) or forcePreProcess:
print("Creating pre-processed training data from raw data")
# Preprocess the data from the csv files of the datasets
# Note that this data is processed in frames
self.frame_preprocess(self.data_dirs, self.data_file_tr)
if self.infer:
# Load the processed data from the pickle file
if not self.additional_validation: #test mode
#print("Called test")
self.load_preprocessed(self.data_file_te)
else: # validation mode
#print("Called validation")
self.load_preprocessed(self.data_file_vl, True)
else: # training mode
#print("Called train")
self.load_preprocessed(self.data_file_tr)
# Reset all the data pointers of the dataloader object
self.reset_batch_pointer(valid=False)
self.reset_batch_pointer(valid=True)
def frame_preprocess(self, data_dirs, data_file, validation_set = False):
'''
Function that will pre-process the pixel_pos.csv files of each dataset
into data with occupancy grid that can be used
params:
data_dirs : List of directories where raw data resides
data_file : The file into which all the pre-processed data needs to be stored
validation_set: true when a dataset is in validation set
'''
# all_frame_data would be a list of list of numpy arrays corresponding to each dataset
# Each numpy array will correspond to a frame and would be of size (numPeds, 3) each row
# containing pedID, x, y
all_frame_data = []
# Validation frame data
valid_frame_data = []
# frameList_data would be a list of lists corresponding to each dataset
# Each list would contain the frameIds of all the frames in the dataset
frameList_data = []
valid_numPeds_data= []
# numPeds_data would be a list of lists corresponding to each dataset
# Each list would contain the number of pedestrians in each frame in the dataset
numPeds_data = []
#each list includes ped ids of this frame
pedsList_data = []
valid_pedsList_data = []
# target ped ids for each sequence
target_ids = []
orig_data = []
# Index of the current dataset
dataset_index = 0
# For each dataset
for directory in data_dirs:
# Load the data from the txt file
print("Now processing: ", directory)
column_names = ['frame_num','ped_id','xmin','ymin','xmax','ymax', 'xFlow', 'yFlow']
# if training mode, read train file to pandas dataframe and process
if self.infer is False:
df = pd.read_csv(directory, dtype={'frame_num':'int','ped_id':'int', 'xFlow':'float', 'yFlow':'float'}, delimiter = ' ', header=None, names=column_names)
self.target_ids = np.array(df.drop_duplicates(subset={'ped_id'}, keep='first', inplace=False)['ped_id'])
else:
# if validation mode, read validation file to pandas dataframe and process
if self.additional_validation:
df = pd.read_csv(directory, dtype={'frame_num':'int','ped_id':'int', 'xFlow':'float', 'yFlow':'float' }, delimiter = ' ', header=None, names=column_names)
self.target_ids = np.array(df.drop_duplicates(subset={'ped_id'}, keep='first', inplace=False)['ped_id'])
# if test mode, read test file to pandas dataframe and process
else:
column_names = ['frame_num','ped_id','xmin','ymin','xmax','ymax','xFlow', 'yFlow']
df = pd.read_csv(directory, dtype={'frame_num':'int','ped_id':'int', 'xFlow':'float', 'yFlow':'float'}, delimiter = ' ', header=None, names=column_names, converters = {c:lambda x: float('nan') if x == '?' else float(x) for c in ['xmin','ymin','xmax','ymax']})
#self.target_ids = np.array(df[df['ymin'].isnull()].drop_duplicates(subset={'ped_id'}, keep='first', inplace=False)['ped_id'])
self.target_ids = np.array(df.drop_duplicates(subset={'ped_id'}, keep='first', inplace=False)['ped_id'])
# convert pandas -> numpy array
data = np.array(df)
#print("DATA",data)
# keep original copy of file
orig_data.append(data)
#swap x and y points (in txt file it is like -> y,x)
data = np.swapaxes(data,0,1)
frameList = []
# get frame numbers
for frameNum in data[0,:].tolist():
if frameNum not in frameList:
frameList.append(frameNum)
#frameList = data[0, :]
# Number of frames
numFrames = len(frameList)
#print("FRAME NUMS",numFrames)
# Add the list of frameIDs to the frameList_data
frameList_data.append(frameList)
# Initialize the list of numPeds for the current dataset
numPeds_data.append([])
valid_numPeds_data.append([])
# Initialize the list of numPeds for the current dataset
numPeds_data.append([])
valid_numPeds_data.append([])
# Initialize the list of numpy arrays for the current dataset
all_frame_data.append([])
# Initialize the list of numpy arrays for the current dataset
valid_frame_data.append([])
# list of peds for each frame
pedsList_data.append([])
valid_pedsList_data.append([])
target_ids.append(self.target_ids)
for ind, frame in enumerate(frameList):
# Extract all pedestrians in current frame
pedsInFrame = data[: , data[0, :] == frame]
#print("peds in %d: %s"%(frame,str(pedsInFrame)))
# Extract peds list
pedsList = pedsInFrame[1, :].tolist()
# Add number of peds in the current frame to the stored data
# Initialize the row of the numpy array
pedsWithPos = []
# For each ped in the current frame
for ped in pedsList:
# Extract their x and y positions
current_xmin = pedsInFrame[2, pedsInFrame[1, :] == ped][0]
current_ymin = pedsInFrame[3, pedsInFrame[1, :] == ped][0]
current_xmax = pedsInFrame[4, pedsInFrame[1, :] == ped][0]
current_ymax = pedsInFrame[5, pedsInFrame[1, :] == ped][0]
xFlow = pedsInFrame[6, pedsInFrame[1, :] == ped][0]
yFlow = pedsInFrame[7, pedsInFrame[1, :] == ped][0]
#print(current_xmin,current_ymin,current_xmax,current_ymax)
# Add their pedID, x, y to the row of the numpy array
pedsWithPos.append([ped, current_xmin, current_ymin, current_xmax, current_ymax, xFlow, yFlow])
# At inference time, data generation and if dataset is a validation dataset, no validation data
if (ind >= numFrames * self.val_fraction) or (self.infer) or (self.generate) or (validation_set):
# Add the details of all the peds in the current frame to all_frame_data
all_frame_data[dataset_index].append(np.array(pedsWithPos))
pedsList_data[dataset_index].append(pedsList)
numPeds_data[dataset_index].append(len(pedsList))
else:
valid_frame_data[dataset_index].append(np.array(pedsWithPos))
valid_pedsList_data[dataset_index].append(pedsList)
valid_numPeds_data[dataset_index].append(len(pedsList))
dataset_index += 1
# Save the arrays in the pickle file
f = open(data_file, "wb")
pickle.dump((all_frame_data, frameList_data, numPeds_data, valid_numPeds_data, valid_frame_data, pedsList_data, valid_pedsList_data, target_ids, orig_data), f, protocol=2)
f.close()
#print("Done here")
def load_preprocessed(self, data_file, validation_set = False):
'''
Function to load the pre-processed data into the DataLoader object
params:
data_file : the path to the pickled data file
validation_set : flag for validation dataset
'''
# Load data from the pickled file
if(validation_set):
print("Loading validaton datasets: ", data_file)
else:
print("Loading train or test dataset: ", data_file)
print("DATA FILE************",data_file)
f = open(data_file, 'rb')
self.raw_data = pickle.load(f)
#print(len(self.raw_data))
f.close()
# Get all the data from the pickle file
self.data = self.raw_data[0]
self.frameList = self.raw_data[1]
self.numPedsList = self.raw_data[2]
self.valid_numPedsList = self.raw_data[3]
self.valid_data = self.raw_data[4]
self.pedsList = self.raw_data[5]
self.valid_pedsList = self.raw_data[6]
self.target_ids = self.raw_data[7]
self.orig_data = self.raw_data[8]
counter = 0
valid_counter = 0
print('Sequence size(frame) ------>',self.seq_length)
print('One batch size (frame)--->-', self.batch_size*self.seq_length)
# For each dataset
for dataset in range(len(self.data)):
# get the frame data for the current dataset
all_frame_data = self.data[dataset]
valid_frame_data = self.valid_data[dataset]
dataset_name = self.data_dirs[dataset].split('/')[-1]
# calculate number of sequence
num_seq_in_dataset = int(len(all_frame_data) / (self.seq_length))
num_valid_seq_in_dataset = int(len(valid_frame_data) / (self.seq_length))
if not validation_set:
print('Training data from training dataset(name, # frame, #sequence)--> ', dataset_name, ':', len(all_frame_data),':', (num_seq_in_dataset))
print('Validation data from training dataset(name, # frame, #sequence)--> ', dataset_name, ':', len(valid_frame_data),':', (num_valid_seq_in_dataset))
else:
print('Validation data from validation dataset(name, # frame, #sequence)--> ', dataset_name, ':', len(all_frame_data),':', (num_seq_in_dataset))
# Increment the counter with the number of sequences in the current dataset
counter += num_seq_in_dataset
valid_counter += num_valid_seq_in_dataset
# Calculate the number of batches
self.num_batches = int(counter/self.batch_size)
# print('***************************************')
# print('Num Batches',self.num_batches)
# print('Counter',counter)
# print('Batch Size',self.batch_size)
# print('***************************************')
self.valid_num_batches = int(valid_counter/self.batch_size)
if not validation_set:
print('Total number of training batches:', self.num_batches)
print('Total number of validation batches:', self.valid_num_batches)
else:
print('Total number of validation batches:', self.num_batches)
# self.valid_num_batches = self.valid_num_batches * 2
def adjustFramesForOpticalFlow(self, seqFrames):
"""
seqFrames: Shape (sequenceLength, numDivers, 6)
return transformed frames (sequenceLength, numDivers,4)
"""
# Forward transform for observations
obsFrames = seqFrames[:self.obs_length]
orig_boxes_obs = obsFrames[:,:,0:4]
transform_observed = np.reshape(obsFrames[1:,0,4:], (orig_boxes_obs.shape[0]-1,2))
obs_transformed = self.transformedBoxes(orig_boxes_obs, transform_observed)
# Inverse transform for predictions
predFrames = np.flip(seqFrames[self.obs_length-1:], axis=(0))
# Change the sign of the transforms
predFrames[:,:,4:] *= -1.0
predBoxes = predFrames[:,:,0:4]
transform_pred = np.reshape(predFrames[1:,0,4:], (predBoxes.shape[0]-1,2))
pred_transformed = self.transformedBoxes(predBoxes, transform_pred)
predRev = np.flip(pred_transformed, axis=(0))
# Join the two together
finalTransforms = np.zeros((seqFrames.shape[0], seqFrames.shape[1], 4), dtype=float)
finalTransforms[:self.obs_length] = obs_transformed[:,:,:]
finalTransforms[self.obs_length:] = predRev[1:,:,:]
return finalTransforms
def transformedBoxes(self, orig_boxes, transforms):
"""
Returns the boxes as seen from the frame of reference of the last frame
orig_boxes: original bounding boxes - each in its own frame of reference. Shape (sequenceLength+1, numDivers, 5)
transforms: The transform gives the deviation of the current frame with respect to the previous frame. shape: (seqLength+1, 2)
"""
transformedFrames = np.zeros_like(orig_boxes, dtype=float)
currIdx = transforms.shape[0] - 1
currDeltaSum = np.zeros((2), dtype=float)
# Last frame unchanged
transformedFrames[currIdx+1,:,:] = orig_boxes[-1,:,:]
while currIdx >= 0:
currDeltaSum += transforms[currIdx]
concatenatedTransform = np.concatenate((currDeltaSum, currDeltaSum))
for i in range(orig_boxes.shape[1]):
if (False in (orig_boxes[currIdx,i] == 0)):
transformedFrames[currIdx, i] = orig_boxes[currIdx,i] + concatenatedTransform
#transformedFrames[currIdx,:] = orig_boxes[currIdx,:] + concatenatedTransform
currIdx -= 1
return transformedFrames
def next_batch(self):
'''
Function to get the next batch of points
'''
# Source data
x_batch = []
# Target data
y_batch = []
# Dataset data
d = []
# pedlist per sequence
numPedsList_batch = []
# pedlist per sequence
PedsList_batch = []
#return target_id
target_ids = []
# Iteration index
i = 0
#print("BATCH_SIZE",self.batch_size)
while i < self.batch_size:
# Extract the frame data of the current dataset
#print("Getting batch from",self.get_file_name())
frame_data = self.data[self.dataset_pointer]
numPedsList = self.numPedsList[self.dataset_pointer]
pedsList = self.pedsList[self.dataset_pointer]
# Get the frame pointer for the current dataset
idx = self.frame_pointer
# While there is still seq_length number of frames left in the current dataset
# Instead of returning an x array of seq length, we will return an array of len seq_length + 1
# of this, x[:-1] becomes the training instance, x[1:] becomes the target
# That is, the output sequence is expected to be the future prediction of the input sequence
if idx + self.seq_length <= len(frame_data):
# All the data in this sequence
seq_source_frame_data = frame_data[idx:idx+self.seq_length]
seq_numPedsList = numPedsList[idx:idx+self.seq_length]
seq_PedsList = pedsList[idx:idx+self.seq_length]
seq_target_frame_data = frame_data[idx+1:idx+self.seq_length+1]
# Number of unique peds in this sequence of frames
x_batch.append(seq_source_frame_data)
y_batch.append(seq_target_frame_data)
numPedsList_batch.append(seq_numPedsList)
PedsList_batch.append(seq_PedsList)
# get correct target ped id for the sequence
#print("******************")
#print(self.frame_pointer,self.seq_length)
#print("TARGET_IDS PRIVATE",self.target_ids)
#print(self.target_ids[self.dataset_pointer][math.floor((self.frame_pointer)/self.seq_length)])
#target_ids.append(self.target_ids[self.dataset_pointer][math.floor((self.frame_pointer)/self.seq_length)])
self.frame_pointer += (self.seq_length)
d.append(self.dataset_pointer)
i += 1
else:
# Not enough frames left
# Increment the dataset pointer and set the frame_pointer to zero
#print("Ticking batch")
self.tick_batch_pointer(valid=False)
#print("TARGET IDS IN NEXT BATCH",target_ids)
#pedSeq = []
#for pedSeq in PedsList_batch
return np.array(x_batch), y_batch, d, numPedsList_batch, np.array(PedsList_batch), target_ids
def next_valid_batch(self):
'''
Function to get the next Validation batch of points
'''
# Source data
x_batch = []
# Target data
y_batch = []
# Dataset data
d = []
# pedlist per sequence
numPedsList_batch = []
# pedlist per sequence
PedsList_batch = []
target_ids = []
# Iteration index
i = 0
while i < self.batch_size:
# Extract the frame data of the current dataset
frame_data = self.valid_data[self.valid_dataset_pointer]
numPedsList = self.valid_numPedsList[self.valid_dataset_pointer]
pedsList = self.valid_pedsList[self.valid_dataset_pointer]
# Get the frame pointer for the current dataset
idx = self.valid_frame_pointer
# While there is still seq_length number of frames left in the current dataset
if idx + self.seq_length < len(frame_data):
# All the data in this sequence
# seq_frame_data = frame_data[idx:idx+self.seq_length+1]
seq_source_frame_data = frame_data[idx:idx+self.seq_length]
seq_numPedsList=numPedsList[idx:idx+self.seq_length]
seq_PedsList = pedsList[idx:idx+self.seq_length]
seq_target_frame_data = frame_data[idx+1:idx+self.seq_length+1]
# Number of unique peds in this sequence of frames
x_batch.append(seq_source_frame_data)
y_batch.append(seq_target_frame_data)
numPedsList_batch.append(seq_numPedsList)
PedsList_batch.append(seq_PedsList)
# get correct target ped id for the sequence
target_ids.append(self.target_ids[self.dataset_pointer][math.floor((self.valid_frame_pointer)/self.seq_length)])
self.valid_frame_pointer += self.seq_length
d.append(self.valid_dataset_pointer)
i += 1
else:
# Not enough frames left
# Increment the dataset pointer and set the frame_pointer to zero
self.tick_batch_pointer(valid=True)
return np.array(x_batch), y_batch, d, numPedsList_batch, PedsList_batch, target_ids
def tick_batch_pointer(self, valid=False):
'''
Advance the dataset pointer
'''
if not valid:
# Go to the next dataset
self.dataset_pointer += 1
# Set the frame pointer to zero for the current dataset
self.frame_pointer = 0
# If all datasets are done, then go to the first one again
if self.dataset_pointer >= len(self.data):
#print("Returning to original dataset")
self.dataset_pointer = 0
print("*******************")
print("now processing: %s"% self.get_file_name())
else:
# Go to the next dataset
self.valid_dataset_pointer += 1
# Set the frame pointer to zero for the current dataset
self.valid_frame_pointer = 0
# If all datasets are done, then go to the first one again
if self.valid_dataset_pointer >= len(self.valid_data):
self.valid_dataset_pointer = 0
print("*******************")
print("now processing: %s"% self.get_file_name(pointer_type = 'valid'))
def reset_batch_pointer(self, valid=False):
'''
Reset all pointers
'''
if not valid:
# Go to the first frame of the first dataset
self.dataset_pointer = 0
self.frame_pointer = 0
else:
self.valid_dataset_pointer = 0
self.valid_frame_pointer = 0
def switch_to_dataset_type(self, train = False, load_data = True):
# function for switching between train and validation datasets during training session
print('--------------------------------------------------------------------------')
if not train: # if train mode, switch to validation mode
if self.additional_validation:
print("Dataset type switching: training ----> validation")
self.orig_seq_lenght, self.seq_length = self.seq_length, self.orig_seq_lenght
self.data_dirs = self.validation_dataset
self.numDatasets = len(self.data_dirs)
if load_data:
self.load_preprocessed(self.data_file_vl, True)
self.reset_batch_pointer(valid=False)
else:
print("There is no validation dataset.Aborted.")
return
else:# if validation mode, switch to train mode
print("Dataset type switching: validation -----> training")
self.orig_seq_lenght, self.seq_length = self.seq_length, self.orig_seq_lenght
self.data_dirs = self.train_dataset
self.numDatasets = len(self.data_dirs)
if load_data:
self.load_preprocessed(self.data_file_tr)
self.reset_batch_pointer(valid=False)
self.reset_batch_pointer(valid=True)
def convert_proper_array(self, x_seq, num_pedlist, pedlist):
#converter function to appropriate format. Instead of direcly use ped ids, we are mapping ped ids to
#array indices using a lookup table for each sequence -> speed
#output: seq_lenght (real sequence lenght+1)*max_ped_id+1 (biggest id number in the sequence)*2 (x,y)
num_inputs = 6
#get unique ids from sequence
unique_ids = pd.unique(np.concatenate(pedlist).ravel().tolist()).astype(int)
# create a lookup table which maps ped ids -> array indices
lookup_table = dict(zip(unique_ids, range(0, len(unique_ids))))
seq_data = np.zeros(shape=(x_seq.shape[0], len(lookup_table), num_inputs))
# create new structure of array
for ind, frame in enumerate(x_seq):
#print("FRAME",frame[:,1:5])
corr_index = [lookup_table[x] for x in frame[:, 0]]
#print("CORR_INDEX",corr_index)
#print("SEQ DATA SHAPE", seq_data[ind, corr_index,:].shape)
#print("FRAME DATA SHAPE",frame[:,1:5].shape)
seq_data[ind, corr_index,:] = frame[:,1:(num_inputs+1)]
x_seq = self.adjustFramesForOpticalFlow(seq_data)
return_arr = Variable(torch.from_numpy(np.array(x_seq)).float())
return return_arr, lookup_table
def add_element_to_dict(self, dict, key, value):
# helper function to add a element to dictionary
dict.setdefault(key, [])
dict[key].append(value)
def get_dataset_path(self, base_path, f_prefix):
# get all datasets from given set of directories
dataset = []
dir_names = unique_list(self.get_all_directory_namelist())
for dir_ in dir_names:
dir_path = os.path.join(f_prefix, base_path, dir_)
file_names = get_all_file_names(dir_path)
[dataset.append(os.path.join(dir_path, file_name)) for file_name in file_names]
return dataset
def get_file_name(self, offset=0, pointer_type = 'train'):
#return file name of processing or pointing by dataset pointer
if pointer_type == 'train':
return self.data_dirs[self.dataset_pointer+offset].split('/')[-1]
elif pointer_type == 'valid':
return self.data_dirs[self.valid_dataset_pointer+offset].split('/')[-1]
def create_folder_file_dict(self):
# create a helper dictionary folder name:file name
self.folder_file_dict = {}
for dir_ in self.base_data_dirs:
folder_name = dir_.split('/')[-2]
file_name = dir_.split('/')[-1]
self.add_element_to_dict(self.folder_file_dict, folder_name, file_name)
def get_directory_name(self, offset=0):
#return folder name of file of processing or pointing by dataset pointer
folder_name = self.data_dirs[self.dataset_pointer+offset].split('/')[-2]
return folder_name
def get_directory_name_with_pointer(self, pointer_index):
# get directory name using pointer index
folder_name = self.data_dirs[pointer_index].split('/')[-2]
return folder_name
def get_all_directory_namelist(self):
#return all directory names in this collection of dataset
folder_list = [data_dir.split('/')[-2] for data_dir in (self.base_data_dirs)]
return folder_list
def get_file_path(self, base, prefix, model_name ='', offset=0):
#return file path of file of processing or pointing by dataset pointer
folder_name = self.data_dirs[self.dataset_pointer+offset].split('/')[-2]
base_folder_name=os.path.join(prefix, base, model_name, folder_name)
return base_folder_name
def get_base_file_name(self, key):
# return file name using folder- file dictionary
return self.folder_file_dict[key]
def get_len_of_dataset(self):
# return the number of dataset in the mode
return len(self.data)
def clean_test_data(self, x_seq, target_id, obs_lenght, predicted_lenght):
#remove (pedid, x , y) array if x or y is nan for each frame in observed part (for test mode)
for frame_num in range(obs_lenght):
nan_elements_index = np.where(np.isnan(x_seq[frame_num][:, 4]))
try:
x_seq[frame_num] = np.delete(x_seq[frame_num], nan_elements_index[0], axis=0)
except ValueError:
print("an error has been occured")
pass
for frame_num in range(obs_lenght, obs_lenght+predicted_lenght):
nan_elements_index = x_seq[frame_num][:, 0] != target_id
try:
x_seq[frame_num] = x_seq[frame_num][~nan_elements_index]
except ValueError:
pass
def clean_ped_list(self, x_seq, pedlist_seq, target_id, obs_lenght, predicted_lenght):
# remove peds from pedlist after test cleaning
target_id_arr = [target_id]
for frame_num in range(obs_lenght+predicted_lenght):
pedlist_seq[frame_num] = x_seq[frame_num][:,0]
def write_to_file(self, data, base, f_prefix, model_name):
# write all files as txt format
self.reset_batch_pointer()
for file in range(self.numDatasets):
path = self.get_file_path(f_prefix, base, model_name, file)
file_name = self.get_file_name(file)
self.write_dataset(data[file], file_name, path)
def write_dataset(self, dataset_seq, file_name, path):
# write a file in txt format
print("Writing to file path: %s, file_name: %s"%(path, file_name))
out = np.concatenate(dataset_seq, axis = 0)
#np.savetxt(os.path.join(path, file_name), out, fmt = "%1d %1.1f %.3f %.3f", newline='\n')
np.savetxt(os.path.join(path, file_name), out, fmt = "%1d %1.1f %.3f %.3f %.3f %.3f %.3f %.3f %.3f %.3f %.3f %.3f %.3f %.3f %.3f %.3f", newline='\n')
def write_to_plot_file(self, data, path):
# write plot file for further visualization in pkl format
self.reset_batch_pointer()
print("Length of data:", len(data))
print("Dataloader.numDatasets:", self.numDatasets)
print("Now starting loop")
for file in range(self.numDatasets):
print("In iteration:", file)
print("Length of data currently:", len(data))
file_name = self.get_file_name(file)
file_name = file_name.split('.')[0] + '.pkl'
print("Writing to plot file path: %s, file_name: %s"%(path, file_name))
with open(os.path.join(path, file_name), 'wb') as f:
pickle.dump(data[file], f)
def get_frame_sequence(self, frame_lenght):
#print("frame pointer, frame length",self.frame_pointer, frame_lenght)
#begin and end of predicted fram numbers in this seq.
begin_fr = (self.frame_pointer - frame_lenght)
end_fr = (self.frame_pointer)
#frame_number = self.orig_data[self.dataset_pointer][begin_fr:end_fr, 0].transpose()
frameNum = self.frameList[self.dataset_pointer][begin_fr]#.transpose()
#print("frames from %d to %d"%(frameNum, frameNum + frame_lenght - 1))
frame_number = np.reshape([float(i) for i in range(int(frameNum),int(frameNum) + frame_lenght)],(frame_lenght))
return frame_number
def get_id_sequence(self, frame_lenght):
#begin and end of predicted fram numbers in this seq.
begin_fr = (self.frame_pointer - frame_lenght)
end_fr = (self.frame_pointer)
id_number = self.orig_data[self.dataset_pointer][begin_fr:end_fr, 1].transpose()
id_number = [int(i) for i in id_number]
return id_number
def get_dataset_dimension(self, file_name):
# return dataset dimension using dataset file name
return self.dataset_dimensions[file_name]