removing phylosignal for now

James-Thorson-NOAA · Sep 18, 2023 · 768efe1 · 768efe1
1 parent 97eb2d2
commit 768efe1
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Showing 3 changed files with 2 additions and 29 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,8 +1,8 @@
 Package: phylosem
 Type: Package
 Title: Phylogenetic Structural Equation Model
-Version: 1.0.0
-Date: 2023-08-15
+Version: 1.0.1
+Date: 2023-09-18
 Authors@R: 
     c(person(given = "James",
              family = "Thorson",
@@ -24,7 +24,6 @@ Depends:
     TMB,
     R (>= 4.0.0),
 Suggests:
-    phylosignal,
     DiagrammeR,
     semPlot,
     phytools,

diff --git a/R/phylosem.R b/R/phylosem.R
@@ -161,19 +161,6 @@
 #'                    nodeLabels = myplot@Vars$name )
 #' }
 #'
-#' # Plot using phylosignal
-#' if( require(phylosignal) ){
-#'   dotplot( my_phylo4d )
-#'   gridplot( my_phylo4d )
-#'
-#'   # Cluster based on phylogeny and traits
-#'   gC = graphClust( my_phylo4d,
-#'                  lim.phylo = 5,
-#'                  lim.trait = 5,
-#'                  scale.lim = FALSE)
-#'   plot(gC, which = "graph", ask = FALSE)
-#' }
-#'
 #' @useDynLib phylosem, .registration = TRUE
 #' @export
 phylosem <-

diff --git a/man/phylosem.Rd b/man/phylosem.Rd