better output structure

JeffersonLab · Apr 21, 2017 · c54b5b7 · c54b5b7
1 parent 314d968
commit c54b5b7
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Showing 2 changed files with 20 additions and 3 deletions.
diff --git a/MCwrapper/MakeMC.csh b/MCwrapper/MakeMC.csh
@@ -150,6 +150,12 @@ endif
 if ( ! -d "$OUTDIR/configurations/" ) then
     mkdir $OUTDIR/configurations/
 endif
+if ( ! -d "$OUTDIR/configurations/generation/" ) then
+    mkdir $OUTDIR/configurations/generation/
+endif
+if ( ! -d "$OUTDIR/configurations/geant/" ) then
+    mkdir $OUTDIR/configurations/geant/
+endif
 if ( ! -d "$OUTDIR/hddm/" ) then
     mkdir $OUTDIR/hddm/
 endif
@@ -351,6 +357,8 @@ if ( "$GENR" != "0" ) then
 	    sed -i 's/TEMPMINE/0.0012/' control'_'$formatted_runNumber'_'$formatted_fileNumber.in
 	endif
 
+	cp $PWD/control'_'$formatted_runNumber'_'$formatted_fileNumber.in $OUTDIR/configurations/geant/
+
 	mv $PWD/control'_'$formatted_runNumber'_'$formatted_fileNumber.in $PWD/control.in
 
 	if ( "$GEANTVER" == "3" ) then
@@ -401,6 +409,7 @@ if ( "$GENR" != "0" ) then
 		if ( "$recon_pre" == "file" ) then
 		    echo "using config file: "$jana_config_file
 		    hd_root ./$STANDARD_NAME'_geant'$GEANTVER'_smeared.hddm' --config=jana_config.cfg -PNTHREADS=$NUMTHREADS
+			rm jana_config.cfg
 		else
 		    set pluginlist=("danarest" "monitoring_hists")
 
@@ -450,7 +459,7 @@ if ( "$GENR" != "0" ) then
 	    	set filename_root=`echo $rootfile | sed -r 's/.{5}$//'`
 			set filetomv="$rootfile"
 			set filecheck=`echo $current_files | grep -c $filetomv`
-			
+
 			if ( "$filecheck" == "0" ) then
 		    	mv $filetomv $filename_root\_$STANDARD_NAME.root
 		    	mv $PWD/$filename_root\_$STANDARD_NAME.root $OUTDIR/root/
@@ -464,7 +473,7 @@ if ( "$GENR" != "0" ) then
 endif
 
 if ( "$gen_pre" != "file" ) then
-    mv $PWD/*.conf $OUTDIR/configurations/
+    mv $PWD/*.conf $OUTDIR/configurations/generation/
 endif
 
 set hddmfiles=`ls | grep .hddm`

diff --git a/MCwrapper/MakeMC.sh b/MCwrapper/MakeMC.sh
@@ -150,6 +150,12 @@ fi
 if [[ ! -d "$OUTDIR/configurations/" ]]; then
     mkdir $OUTDIR/configurations/
 fi
+if [[ ! -d "$OUTDIR/configurations/generation/" ]]; then
+    mkdir $OUTDIR/configurations/generation/
+fi
+if [[ ! -d "$OUTDIR/configurations/geant/" ]]; then
+    mkdir $OUTDIR/configurations/geant/
+fi
 if [[ ! -d "$OUTDIR/hddm/" ]]; then
     mkdir $OUTDIR/hddm/
 fi
@@ -354,6 +360,7 @@ if [[ "$GENR" != "0" ]]; then
 	    sed -i 's/TEMPMINE/0.0012/' control'_'$formatted_runNumber'_'$formatted_fileNumber.in
 	fi
 
+	cp $PWD/control'_'$formatted_runNumber'_'$formatted_fileNumber.in $OUTDIR/configurations/geant/
 	mv $PWD/control'_'$formatted_runNumber'_'$formatted_fileNumber.in $PWD/control.in
 
 	if [[ "$GEANTVER" == "3" ]]; then
@@ -405,6 +412,7 @@ if [[ "$GENR" != "0" ]]; then
 		if [[ "$recon_pre" == "file" ]]; then
 			echo "using config file: "$jana_config_file
 			hd_root ./$STANDARD_NAME'_geant'$GEANTVER'_smeared.hddm' --config=jana_config.cfg -PNTHREADS=$NUMTHREADS
+			rm jana_config.cfg
 		else
 
 			declare -a pluginlist=("danarest" "monitoring_hists")
@@ -469,7 +477,7 @@ if [[ "$GENR" != "0" ]]; then
     fi
 fi
 if [[ "$gen_pre" != "file" ]]; then
-	mv $PWD/*.conf $OUTDIR/configurations/
+	mv $PWD/*.conf $OUTDIR/configurations/generation/
 fi
 hddmfiles=$(ls | grep .hddm)
 if [[ "$hddmfiles" != "" ]]; then