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KrasnitzLab

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  1. SCGV SCGV Public

    SCGV is an interactive graphical tool for single-cell genomics data, with emphasis on single-cell genomics of cancer

    Python 8 2

  2. RAIDS RAIDS Public

    Accurate and robust inference of genetic ancestry from cancer-derived molecular data across genomic platforms

    R 5 4

  3. CNVMetrics CNVMetrics Public

    R Package to compare copy number variant (CNV) results from multiple samples/methods

    R 4 2

  4. CNprep CNprep Public

    CNprep Package - Pre-process DNA Copy Number (CN) Data for Detection of CN Events

    R 3 2

  5. sgains sgains Public

    Sparse Genomic Analysis of Individual Nuclei by Sequencing

    Python 1 1

  6. OrganoidsToolBox OrganoidsToolBox Public

    Enabling organoid analyses using drug sreening, RNA-seq, exome-seq

    R 1 1

Repositories

Showing 10 of 11 repositories
  • RAIDS Public

    Accurate and robust inference of genetic ancestry from cancer-derived molecular data across genomic platforms

    KrasnitzLab/RAIDS’s past year of commit activity
    R 5 4 0 0 Updated Oct 22, 2024
  • CNVMetrics Public

    R Package to compare copy number variant (CNV) results from multiple samples/methods

    KrasnitzLab/CNVMetrics’s past year of commit activity
    R 4 2 4 0 Updated Jul 18, 2023
  • OrganoidsToolBox Public

    Enabling organoid analyses using drug sreening, RNA-seq, exome-seq

    KrasnitzLab/OrganoidsToolBox’s past year of commit activity
    R 1 1 0 0 Updated Oct 25, 2022
  • SCclust Public

    Segmentation and Clustering of Single Cell Sequencing Copy Number Profiles

    KrasnitzLab/SCclust’s past year of commit activity
    R 0 MIT 1 0 0 Updated Aug 1, 2022
  • CNprep Public

    CNprep Package - Pre-process DNA Copy Number (CN) Data for Detection of CN Events

    KrasnitzLab/CNprep’s past year of commit activity
    R 3 2 1 0 Updated May 19, 2022
  • KrasnitzLab/p53-LOH-figures’s past year of commit activity
    R 0 0 0 0 Updated May 14, 2022
  • SCGV Public

    SCGV is an interactive graphical tool for single-cell genomics data, with emphasis on single-cell genomics of cancer

    KrasnitzLab/SCGV’s past year of commit activity
    Python 8 MIT 2 0 0 Updated Mar 23, 2022
  • conda-recipes Public
    KrasnitzLab/conda-recipes’s past year of commit activity
    Shell 0 0 0 0 Updated Dec 2, 2021
  • sgains Public

    Sparse Genomic Analysis of Individual Nuclei by Sequencing

    KrasnitzLab/sgains’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Sep 3, 2021
  • sgains_docker Public
    KrasnitzLab/sgains_docker’s past year of commit activity
    Dockerfile 0 0 0 0 Updated May 1, 2019

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