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Adding cell id (input rowname) in PHATE output (Y_phate in python tutorial :EmbryoidBody) #121

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parkjooyoung99 opened this issue Dec 7, 2022 · 0 comments
Open

Adding cell id (input rowname) in PHATE output (Y_phate in python tutorial :EmbryoidBody) #121

parkjooyoung99 opened this issue Dec 7, 2022 · 0 comments
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@parkjooyoung99
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parkjooyoung99 commented Dec 7, 2022 •
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Is your feature request related to a problem? Please describe.
I am trying to use PHATE output (phate coordinate) for the other analysis, where I need to know coordinates per cell. However, the output only shows the coordinate but not the cell belonging to.

Describe the solution you'd like
It would be great if PHATE output contains coordinate information along with sample(cell) id, maybe as dataframe where rownames are cell id.

Describe alternatives you've considered

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