install pandoc r.yml #22
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| name: R Package CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| steps: | |
| # Step 1: Check out the repository | |
| - name: Check out the repository | |
| uses: actions/checkout@v4 | |
| # Step 2: Set up R environment | |
| - name: Set up R | |
| uses: r-lib/actions/setup-r@v2 | |
| # Step 3: Install system dependencies for R | |
| - name: Install system dependencies for R | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y libcurl4-openssl-dev libxml2-dev libssl-dev | |
| sudo apt-get install -y libfreetype6-dev libharfbuzz-dev libfribidi-dev \ | |
| libpng-dev libjpeg-dev libtiff-dev libcairo2-dev \ | |
| libfontconfig1-dev libpango1.0-dev pandoc | |
| # Step 4: Cache R package dependencies | |
| - name: Cache R package dependencies | |
| uses: actions/cache@v3 | |
| with: | |
| path: ~/R/library | |
| key: ${{ runner.os }}-r-${{ hashFiles('renv.lock') }} | |
| restore-keys: | | |
| ${{ runner.os }}-r- | |
| # Step 5: Install missing R packages (before devtools) | |
| - name: Install R packages required by devtools | |
| run: | | |
| Rscript -e 'install.packages(c("usethis", "pkgdown", "rcmdcheck", "rversions", "urlchecker"), repos="http://cran.us.r-project.org")' | |
| # Step 6: Install devtools and dependencies | |
| - name: Install devtools and other dependencies | |
| run: | | |
| Rscript -e 'install.packages(c("devtools", "rmarkdown"), repos="http://cran.us.r-project.org")' | |
| if [ -f "renv.lock" ]; then | |
| Rscript -e 'install.packages("renv"); renv::restore()' | |
| else | |
| Rscript -e 'devtools::install_deps(dep = TRUE)' | |
| fi | |
| # Step 7: Run tests | |
| - name: Run tests | |
| run: | | |
| Rscript -e 'devtools::test()' | |
| # Step 8: R CMD CHECK | |
| - name: R CMD CHECK | |
| run: | | |
| Rscript -e 'devtools::check()' |