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Things enabled by this project #38

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3 of 6 tasks
borismarin opened this issue Oct 6, 2015 · 0 comments
Open
3 of 6 tasks

Things enabled by this project #38

borismarin opened this issue Oct 6, 2015 · 0 comments

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@borismarin
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borismarin commented Oct 6, 2015

We can finally start ticking these boxes, and fix bugs as they appear (infrastructure almost usable!)

OSB/geppetto: discuss with @adrianq @tarelli

  • no need to parse neuroml models twice (as nml and as lems). We get org.?ml.model.DomainType extends org.lemsml.model.Component
  • plotting arbitrary expressions. Components have a scope.evaluate(symbol) method.
  • rendering equations as mathml. There are methods to render expressions as mathml(tex), C, java, python (and anything else we care to implement).
  • getting lists of cells/networks/channels independently of file names (i.e. na.channel.nml). There are methods to get all components of a given type (including extensions).

Elsewhere:

  • automatic generation of API / xml schema directly from Lems Component Types. No more duplication of work maintaining defs and a xsd! See here
  • code generation via a "proper"(room for a lot of improvement) semantic model for Lems, with a well defined pipeline (visitors) for producing intermediate representations and merging them with templates.
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