This repository contains a CSV file mapping Entrez gene IDs to gene IDs used in Kaggle's Mechanism of Action (MoA) prediction challenge.
filename: gene_mapping.csv
- old = Entrez gene ID
- new = Kaggle's gene ID
It also contains a CSV file mapping the PRISM cell line IDs with the cell line IDs used in the challenge.
filename: cell_mapping.csv
- old = cell line ID
- new = Kaggle's cell line ID
This cell line ID can be used with another CSV file (cell_info.csv) to obtain the Cancer Cell Line Name (ccle_name). Details about each Cancer Cell Line can be found by browsing the DepMap portal.