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This repository contains files mapping Entrez gene IDs with gene IDs used in Kaggle's MoA prediction challenge

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LISHarvard/moa_challenge

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This repository contains a CSV file mapping Entrez gene IDs to gene IDs used in Kaggle's Mechanism of Action (MoA) prediction challenge.

filename: gene_mapping.csv

  • old = Entrez gene ID
  • new = Kaggle's gene ID

It also contains a CSV file mapping the PRISM cell line IDs with the cell line IDs used in the challenge.

filename: cell_mapping.csv

  • old = cell line ID
  • new = Kaggle's cell line ID

This cell line ID can be used with another CSV file (cell_info.csv) to obtain the Cancer Cell Line Name (ccle_name). Details about each Cancer Cell Line can be found by browsing the DepMap portal.

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This repository contains files mapping Entrez gene IDs with gene IDs used in Kaggle's MoA prediction challenge

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