setting up github actions

.github/workflows/main.yml

@@ -38,10 +38,6 @@ jobs:
       - Formatting
     steps:
     - uses: nschloe/action-cached-lfs-checkout@v1
-
-    - name: Compute checksums
-      run: |
-        sha256sum test_data/raw_hic/sorted_hic_test_YBP2_SRR27548905_PRJNA1013711_1.fastq.gz
 
     - name: Download busco lineage
       run: |
@@ -65,6 +61,11 @@ jobs:
         cd test_data/gx_test_db
         sync_files.py get --mft https://ftp.ncbi.nlm.nih.gov/genomes/TOOLS/FCS/database/test-only/test-only.manifest --dir ./test-only
 
+    - name: Install and set up time command (needed by FCS-GX for debug purposes)
+      run: |
+        sudo apt-get update
+        sudo apt-get install -y time
+
     - name: Test workflow
       uses: snakemake/snakemake-github-action@v1.24.0
       with: