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minFQ_BAM

A simple tool for reading and parsing BAM file data.

Installation Instructions

python3>=3.8

git clone https://github.com/tom-murray98/minFQ_BAM/
cd minFQ_BAM
python3 -m venv venv
source venv/bin/activate
pip install -r requirements.txt

Usage

Usage: python3 minFQ_ReadBam.py [OPTIONS] FILE_PATH

Options:
  --rg    Prints @RG tags only found in the BAM file header.
  --help  Show this message and exit.

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For reading of BAM files in minFQ

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