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[WIP] Analysis#38

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lilyminium wants to merge 39 commits intomasterMDAnalysis/UserGuide:masterfrom distancesMDAnalysis/UserGuide:distancesCopy head branch name to clipboard

+386,973-11,640

Commits

Commits on Dec 28, 2019

• added rms

  lilyminium

  committed
  6773912

• undid ignore notebooks

  lilyminium

  committed
  d05c657

• added note boxes

  lilyminium

  committed
  31aed4d

Commits on Jan 22, 2020

• added psa

  lilyminium

  committed
  48d939d

Commits on Jan 23, 2020

• added trajectory similarity

  lilyminium

  committed
  1f425d2

• added rst

  lilyminium

  committed
  43d3a63

• reduce menu level

  lilyminium

  committed
  aa5452f

• updated hes

  lilyminium

  committed
  2b27a53

Commits on Jan 27, 2020

• added more analysis

  lilyminium

  committed
  cc0f568

• started rdf

  lilyminium

  committed
  b986abc

• more rdf

  lilyminium

  committed
  116abe5

Commits on Jan 30, 2020

• added gifs

  lilyminium

  committed
  ce03523

Commits on Feb 6, 2020

• wrote script to execute and clean notebooks

  lilyminium

  committed
  9661bb2

• reorganised notebooks

  lilyminium

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  e60dc5f

• fixed merge conflict

  lilyminium

  committed
  971774f

Commits on Feb 7, 2020

• updated trajectories to html

  lilyminium

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  286b07c

• refresh transformations notebook

  lilyminium

  committed
  ced30dd

• moved transformations back

  lilyminium

  committed
  2b73a88

Commits on Feb 10, 2020

• updated rmsf to use equilibrium data

  lilyminium

  committed
  dcd4316

• updated dependencies

  lilyminium

  committed
  e8627ec

• added hole

  lilyminium

  committed
  a51f97a

Commits on Feb 17, 2020

• updated hole

  lilyminium

  committed
  2bee421

Commits on Feb 19, 2020

• updated hole2, added density_analysis, started blurb on diffusionmap

  lilyminium

  committed
  1888f12

• switched trajectory transformation order

  lilyminium

  committed
  893ebe1

• saved density nglview

  lilyminium

  committed
  c7e838c

• Merge branch 'master' into distances

  lilyminium

  authored
  fd9596d

Commits on Feb 20, 2020

• fixed hole link

  lilyminium

  committed
  dbcbdc9

• Merge branch 'distances' of github.com:MDAnalysis/UserGuide into distances

  lilyminium

  committed
  ad26988

Commits on Feb 22, 2020

• started dmap

  lilyminium

  committed
  a434db7

• added dmap entry

  lilyminium

  committed
  1b1d66f

• saved widget state

  lilyminium

  committed
  90accb4

• added plotly js to nbsphinx

  lilyminium

  committed
  975474a

Commits on Feb 23, 2020

• fixed notebook typos

  lilyminium

  committed
  89ca0f3

Commits on Feb 29, 2020

• updated hole nb

  lilyminium

  committed
  701bfa8

• updated pore gif

  lilyminium

  committed
  91a2120

• updated pairwise tutorial

  lilyminium

  committed
  fe7fc98

Commits on Mar 10, 2020

• added dssp

  lilyminium

  committed
  418a226

Commits on Mar 13, 2020

• added helanal

  lilyminium

  committed
  87c4484

• added helanal images

  lilyminium

  committed
  791774f