fix numbering

MPI-Dortmund · Dec 19, 2024 · 282ae3b · 282ae3b
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diff --git a/docs/strategies/strategy_02.rst b/docs/strategies/strategy_02.rst
@@ -51,6 +51,6 @@ To calculate the mask, all you need is your tomogram and the latest TomoTwin mod
 
  .. prompt:: bash $
 
-    CUDA_VISIBLE_DEVICES=0,1 tomotwin_embed.py tomogram -v tomo/tomo.mrc -m tomotwin_latest.pth --mask mask/tomo_mask.mrc
+    CUDA_VISIBLE_DEVICES=0,1 tomotwin_embed.py tomogram -v tomo/tomo.mrc -m tomotwin_latest.pth --mask mask/tomo_mask.mrc -o out/embed/tomo/ -s 2
 
 Once the embeddings are computed, you can simply continue with either the reference or clustering workflow.
diff --git a/docs/strategies/strategy_04.rst b/docs/strategies/strategy_04.rst
@@ -1,4 +1,4 @@
-Strategy 3: Manually refining UMAPs from selected embeddings (Napari GPU workaround)
+Strategy 4: Manually refining UMAPs from selected embeddings (Napari GPU workaround)
 ========================================================
 
 When to use it