From 8ce8838b8092929f7e9f2f8f715ce619076a606f Mon Sep 17 00:00:00 2001 From: elena-krismer Date: Mon, 14 Aug 2023 14:34:53 +0200 Subject: [PATCH] #221 m1 mac installation instructions --- README.md | 8 ++++++++ docs/installation.md | 9 ++++++++- 2 files changed, 16 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index 4c05c8da..ed34566b 100644 --- a/README.md +++ b/README.md @@ -127,3 +127,11 @@ See the [HISTORY.md](HISTORY.md) for a full overview of the changes made in each ### How can I resolve the Microsoft visual error message when installing: error: Microsoft Visual C++ 14.0 or greater is required. Get it with "Microsoft C++ Build Tools"? Please, find a description on how to update required tools [here](https://github.com/MannLabs/alphapeptstats/issues/158). + +## How to resolve ERROR:: Could not find a local HDF5 installation. on Mac M1? + +Before installing AlphaPeptStats you might need to install pytables first: + +```` +conda install -c anaconda pytables +```` diff --git a/docs/installation.md b/docs/installation.md index 2ebc5fc9..e350cd45 100644 --- a/docs/installation.md +++ b/docs/installation.md @@ -12,4 +12,11 @@ conda activate alphastats AlphaStats can be installed in an existing Python 3.8 environment with a single `bash` command. ```bash pip install alphastats -``` \ No newline at end of file +``` + +#### MacOS M1 +On M1 Mac the installation initally might fail due to a missing local HDF5 installation. To solve this issue install pytables manually: + +```` +conda install -c anaconda pytables +`` \ No newline at end of file