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FIX: DIANN loader did not load gene names
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Mikhail Lebedev committed Aug 21, 2024
1 parent ba7bb22 commit d52b936
Showing 1 changed file with 2 additions and 0 deletions.
2 changes: 2 additions & 0 deletions alphastats/loader/DIANNLoader.py
Original file line number Diff line number Diff line change
Expand Up @@ -12,6 +12,7 @@ def __init__(
file,
intensity_column="[sample]",
index_column="Protein.Group",
gene_names_column="Genes",
sep="\t",
**kwargs,
):
Expand All @@ -25,6 +26,7 @@ def __init__(
"""

super().__init__(file, intensity_column, index_column, sep)
self.gene_names = gene_names_column
self.software = "DIANN"
self.no_sample_column = [
"PG.Q.value",
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