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pyproject.toml
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pyproject.toml
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[project]
name = "jobflow-remote"
description = "Jobflow Remote is a Python package to run jobflow workflows on remote resources"
readme = "README.md"
keywords = []
license = { text = "modified BSD" }
authors = [{ name = "Guido Petretto", email = "guido.petretto@matgenix.com" }]
dynamic = ["version"]
classifiers = [
"Development Status :: 5 - Production/Stable",
"Intended Audience :: Information Technology",
"Intended Audience :: Science/Research",
"Intended Audience :: System Administrators",
"Operating System :: OS Independent",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3.9",
"Topic :: Other/Nonlisted Topic",
"Topic :: Scientific/Engineering",
]
requires-python = ">=3.9"
dependencies = [
"fabric ~= 3.2",
"flufl.lock ~= 8.0",
"jobflow >= 0.1.14",
"psutil >= 5.9,< 7.0",
"pydantic ~= 2.4",
"qtoolkit ~= 0.1, >= 0.1.4",
"rich ~= 13.7",
"ruamel.yaml >= 0.17",
"schedule ~= 1.2",
"supervisor ~= 4.2",
"tomlkit ~= 0.12",
"typer ~= 0.9",
]
[project.optional-dependencies]
dev = ["pre-commit>=3.0.0"]
tests = ["docker ~= 7.0", "pytest ~= 8.0", "pytest-cov >= 4,< 6"]
docs = [
"autodoc_pydantic>=2.0.0",
"pydata-sphinx-theme",
"sphinx",
"sphinx-copybutton",
"sphinx_design",
"sphinxcontrib-mermaid",
]
[project.scripts]
jf = "jobflow_remote.cli.jf:app"
[project.urls]
homepage = "https://Matgenix.github.io/jobflow-remote/"
repository = "https://github.com/Matgenix/jobflow-remote"
documentation = "https://Matgenix.github.io/jobflow-remote/"
changelog = "https://matgenix.github.io/jobflow-remote/changelog"
[tool.setuptools.package-data]
jobflow_remote = ["py.typed"]
[build-system]
requires = ["setuptools >= 42", "versioningit ~= 1.0", "wheel"]
build-backend = "setuptools.build_meta"
[tool.versioningit.vcs]
method = "git"
default-tag = "0.0.1"
[tool.ruff]
target-version = "py39"
[tool.ruff.lint]
select = ["ALL"]
ignore = [
"ANN", # TODO fix all ANN errors
"ARG", # TODO fix unused method argument
"BLE001",
"C408", # Unnecessary (dict/list/tuple) call - remove call
"C901", # function too complex
"COM812", # trailing comma missing
"D",
"D205",
"DTZ", # datetime-tz-now
"E501", # TODO fix line too long
"EM", # exception message must not use f-string literal
"ERA001", # found commented out code
"FA100", # TODO fix FA errors
"FBT001",
"FBT002",
"FIX002",
"G004", # logging uses fstring
"ISC001",
"N802", # TODO maybe fix these
"PD011", # pandas-use-of-dot-values
"PERF203", # try-except-in-loop
"PGH003",
"PLR0911", # too many returns
"PLR0912", # too many branches
"PLR0913", # too many arguments
"PLR0915", # too many statements
"PLR2004", # magic value used in comparison
"PT004", # pytest-missing-fixture-name-underscore
"PT006", # pytest-parametrize-names-wrong-type
"PT013", # pytest-incorrect-pytest-import
"PTH", # prefer Pathlib to os.path
"RUF013", # implicit-optional
"S106",
"S110",
"S311",
"S324", # use of insecure hash function
"S507", # paramiko auto trust
"S602",
"SIM105", # contextlib.suppress(Exception) instead of try-except
"SLF", # private member accessed outside class
"T201", # print statement
"TD", # TODOs
"TRY003", # long message outside exception class
]
pydocstyle.convention = "numpy"
isort.known-first-party = ["jobflow_remote"]
isort.split-on-trailing-comma = false
[tool.ruff.format]
docstring-code-format = true
[tool.ruff.lint.per-file-ignores]
"__init__.py" = ["F401"]
"**/tests/*" = ["INP001", "S101"]
"**/testing/*" = ["S101"]
[tool.mypy]
ignore_missing_imports = true
strict_optional = false
plugins = "pydantic.mypy"
follow_imports = "skip"
warn_redundant_casts = true
warn_unused_ignores = true
check_untyped_defs = false
no_implicit_reexport = true
disallow_untyped_defs = false
[tool.pydantic-mypy]
init_forbid_extra = true
init_typed = true
warn_required_dynamic_aliases = true
[tool.pytest.ini_options]
filterwarnings = [
"ignore:.*POTCAR.*:UserWarning",
"ignore:.*input structure.*:UserWarning",
"ignore:.*is not gzipped.*:UserWarning",
"ignore:.*magmom.*:UserWarning",
"ignore::DeprecationWarning",
]
[tool.coverage.run]
include = ["src/*"]
parallel = true
branch = true
[tool.coverage.paths]
source = ["src/"]
[tool.coverage.report]
skip_covered = true
show_missing = true
exclude_lines = [
'^\s*@overload( |$)',
'^\s*assert False(,|$)',
'if typing.TYPE_CHECKING:',
]