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TODO.md

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  • Properly name the classes:

    • conf -> subisotopologue
    • iso -> molecule
    • partialExpProbs -> partialProbs
    • L... -> log_...

  • Types:

    • why get_isotopeNo is an int and not a signed int?
    • the same with the subisotopologue configurations.

  • general WTF:

    • get_conf_signature ???
    • IsoOrderedGenerator::candidate ???
    • IsoOrderedGenerator::terminate_search ???
    • IsoLayeredGenerator::advanceToNextConfiguration
      • why does it print out things to the console???
      • why is advanceToNextConfiguration_internal public, if it's called internal?
        • it ain't used anywhere else beyond that class anyway.