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@McTavishLab

McTavishLab

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  1. physcraper physcraper Public

    Welcome to Physcraper’s repository! Automatic gene tree updating using the Open Tree of Life.

    Python 13 6

  2. extensiphy extensiphy Public

    Pipeline to place taxa in a sequence alignment and phylogeny using NGS reads

    Python 2 2

  3. Human-application-Dplus Human-application-Dplus Public

    Forked from LeslyLopezFang/Human-application-Dplus

    Python

  4. jupyter_OpenTree_tutorials jupyter_OpenTree_tutorials Public

    Jupyter Notebook

  5. R_OpenTree_tutorials R_OpenTree_tutorials Public

    Tutorials to use Open Tree of Life services using R.

    HTML 1 1

Repositories

Showing 10 of 36 repositories
  • AvesData Public

    Data deposit for Aves synthetic tree

    McTavishLab/AvesData’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 13, 2024
  • AvesTreeCode Public
    McTavishLab/AvesTreeCode’s past year of commit activity
    Python 0 BSD-2-Clause 0 0 0 Updated Oct 16, 2024
  • mctavishlab.github.io Public
    McTavishLab/mctavishlab.github.io’s past year of commit activity
    HTML 2 1 0 0 Updated Jun 3, 2024
  • OpenTreeCLO Public

    Linking data between ebird and open tree

    McTavishLab/OpenTreeCLO’s past year of commit activity
    Jupyter Notebook 0 0 1 0 Updated May 9, 2024
  • GradPhylo Public

    UC Merced QSB/ES 244

    McTavishLab/GradPhylo’s past year of commit activity
    6 0 0 0 Updated May 1, 2024
  • jupyter_OpenTree_tutorials Public
    McTavishLab/jupyter_OpenTree_tutorials’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated May 18, 2023
  • GBIF-Biodiverse-OpenTree Public

    Linking data between GBIF, Biodiverse, and Open Tree of Life

    McTavishLab/GBIF-Biodiverse-OpenTree’s past year of commit activity
    Python 2 AGPL-3.0 0 0 0 Updated Dec 2, 2022
  • collab-paper Public

    McTavish Lab collab paper on usage of Phsycraper https://github.com/McTavishLab/physcraper

    McTavishLab/collab-paper’s past year of commit activity
    Jupyter Notebook 1 GPL-3.0 0 0 0 Updated Nov 7, 2022
  • extensiphy Public

    Pipeline to place taxa in a sequence alignment and phylogeny using NGS reads

    McTavishLab/extensiphy’s past year of commit activity
    Python 2 GPL-3.0 2 2 0 Updated Aug 24, 2022
  • BIO144 Public

    Files for BIO144, Phylogenetics

    McTavishLab/BIO144’s past year of commit activity
    HTML 1 0 0 0 Updated May 26, 2022
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