.travis.yml

language: python
python:
  - "3.7"
# command to install dependencies

  
before_install:
  - sudo apt-get update
  
install:
  - wget http://repo.continuum.io/miniconda/Miniconda-latest-Linux-x86_64.sh -O miniconda.sh
  - chmod +x miniconda.sh
  - bash miniconda.sh -b -p $HOME/miniconda
  - export PATH="$HOME/miniconda/bin:$PATH"
  - conda config --set always_yes yes --set changeps1 no
  - conda update -q conda
  - conda env create -f cond_env.yml
  - source activate physcraper_env
  - pip install -r requirements.txt
  - pip install -e .

  - export PYTHONPATH=$PYTHONPATH:$(pwd)
  # install requirements for testing
  - pip install codecov
  - pip install pytest pytest-cov
  


  

  - wget 'https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz'
  - gunzip  -cd taxdump.tar.gz | (tar xvf - names.dmp nodes.dmp)
  - mv *.dmp taxonomy/



script:  
  #- py.test tests/ --setup-only
  #- sh tests/run_tests.sh
  - pytest --cov=./ tests

after_success:
  - codecov