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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,44 @@ | ||
| classdef TrainMapTest < matlab.unittest.TestCase | ||
| % Copyright 2014 - 2016 The MathWorks, Inc. | ||
|
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| methods ( Test ) | ||
| function train(testCase) | ||
| % Create data | ||
| dim = 2; | ||
| N=20000; | ||
| N_test = N/5; | ||
| data = randn(dim+1,N); | ||
| target = [data(1,:);data(2,:);data(3,:) + data(2,:).^2]; | ||
| test = target(:,1:N_test); | ||
| train = target(:,N_test+1:end); | ||
|
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| % Create objective and map | ||
| obj1 = GaussianKLObjective(train, test, 1); | ||
| obj2 = GaussianKLObjective(train, test); | ||
| map_options = ATMOptions(); | ||
| map_options.maxDegrees = MultiIndex([3,5]) | ||
| msets2 = [CreateTotalOrder(1,1), CreateTotalOrder(2,1)] | ||
| msets1 = [CreateTotalOrder(2,1)] | ||
|
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| % Print test error before | ||
| map1 = TrainMapAdaptive(msets1, obj1, map_options); | ||
| map2 = TrainMapAdaptive(msets2, obj2, map_options); | ||
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| % Evaluate test samples after training | ||
| KS_stat1 = KSStatistic(map1,test); | ||
| KS_stat2 = KSStatistic(map2,test); | ||
| testCase.verifyTrue(KS_stat1 < 0.1); | ||
| testCase.verifyTrue(KS_stat2 < 0.1); | ||
| end | ||
| end | ||
| end | ||
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| % Perform Kolmogorov-Smirnov test | ||
| function KS_stat = KSStatistic(map,samples) | ||
| pullback_evals = Evaluate(map,samples); | ||
| sorted_samples = sort(pullback_evals(:)); | ||
| samps_cdf = (1 + erf(sorted_samples/sqrt(2)))/2; | ||
| samps_ecdf = (1:numel(sorted_samples))'/numel(sorted_samples); | ||
| KS_stat = max(abs(samps_ecdf - samps_cdf)); | ||
| end |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,9 +1,41 @@ | ||
| from skbuild import setup | ||
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| import os, sys, site | ||
| import warnings | ||
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| def get_install_locations(): | ||
| """Return the installation directory, or '' if no directory could be found | ||
| Adapted from stack overflow post https://stackoverflow.com/a/36205159 | ||
| """ | ||
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| if '--user' in sys.argv: | ||
| paths = (site.getusersitepackages(),) | ||
| else: | ||
| py_version = f'{sys.version_info[0]}.{sys.version_info[1]}' | ||
| paths = [ | ||
| sys.prefix + f'/lib/python{py_version}/dist-packages/', | ||
| sys.prefix + f'/lib/python{py_version}/site-packages/', | ||
| sys.prefix + f'/local/lib/python{py_version}/dist-packages/', | ||
| sys.prefix + f'/local/lib/python{py_version}/site-packages/', | ||
| f'/Library/Frameworks/Python.framework/Versions/{py_version}/lib/python{py_version}/site-packages/' | ||
| ] | ||
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| for path in paths: | ||
| if os.path.exists(path): | ||
| parts = path.split('/') | ||
| lib_indices = [index for index, item in enumerate(parts) if item == 'lib'] | ||
| return path, '/'.join(parts[0:(lib_indices[-1]+1)]) | ||
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| return '' | ||
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| site_folder, lib_folder = get_install_locations() | ||
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| setup( | ||
| packages=['mpart'], | ||
| package_dir={'mpart': 'bindings/python/package'}, | ||
| package_data={'mpart':['**/*pympart*']}, | ||
| include_package_data=True, | ||
| cmake_args=['-DKokkos_ENABLE_THREADS:BOOL=ON', '-DPYTHON_INSTALL_SUFFIX=bindings/python/package/', '-DMPART_JULIA:BOOL=OFF', '-DMPART_MATLAB:BOOL=OFF', '-DMPART_BUILD_TESTS:BOOL=OFF', '-DMPART_PYTHON:BOOL=ON', '-DPYTHON_INSTALL_PREFIX='] | ||
| cmake_args=['-DKokkos_ENABLE_THREADS:BOOL=ON', f'-DSKBUILD_LIB_RPATH={lib_folder}', f'-DSKBUILD_SITE_PATH={site_folder}', '-DPYTHON_INSTALL_SUFFIX=bindings/python/package/', '-DMPART_JULIA:BOOL=OFF', '-DMPART_MATLAB:BOOL=OFF', '-DMPART_BUILD_TESTS:BOOL=OFF', '-DMPART_PYTHON:BOOL=ON', '-DPYTHON_INSTALL_PREFIX='] | ||
| ) |
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