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Feature Request: Custom Codon Tables #17

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aubreybailey opened this issue Sep 27, 2023 · 0 comments
Open

Feature Request: Custom Codon Tables #17

aubreybailey opened this issue Sep 27, 2023 · 0 comments

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@aubreybailey
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Great work folks!
I was using dnachisel for non-model organisms, and wondered if it would be reasonable to allow the substitution of a custom codon frequency table from an uploaded JSON or CSV.

I think I can volunteer a snippet to convert a pandas df to the nested dictionary format that dnachisel wants.

potential impact: this might cause interface logic problems with your new codon-pair additions.

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