GitHub - ModelDBRepository/152292: PreBotzinger Complex inspiratory neuron with NaP and CAN currents (Park and Rubin 2013)

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PreBotzinger Complex inspiratory neuron with NaP and CAN currents (Park and Rubin 2013)

modeldb.science/152292

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Name		Name	Last commit message	Last commit date
Latest commit History 1 Commit
OneCellTwoOsc.ode		OneCellTwoOsc.ode
OneCellTwoOsc.ode.setdb		OneCellTwoOsc.ode.setdb
OneCellTwoOsc.ode.setsb		OneCellTwoOsc.ode.setsb
OneCellTwoOsc.ode.setsdb		OneCellTwoOsc.ode.setsdb
fig2a.png		fig2a.png
fig2b.png		fig2b.png
fig2c.png		fig2c.png
readme.html		readme.html
screenshot.png		screenshot.png

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<html><pre>
This is the readme for the model associated with the paper

Park C, Rubin JE (2013) Cooperation of intrinsic bursting and calcium
oscillations underlying activity patterns of model pre-Botzinger
complex neurons. J Comput Neurosci 34:345-66

This model written in XPP was implemented by Jon Rubin and Choongseok
Park.

XPP is freely available at <a href="http://www.math.pitt.edu/~bard/xpp/xpp.html">http://www.math.pitt.edu/~bard/xpp/xpp.html</a>

To run the model in it's default setting start with a command like
(depends on your platform):

xppaut OneCellTwoOsc.ode

Once XPP starts select Initalconds -> (G)o to see an figure like this:

<img src="./screenshot.png" alt="screenshot">

Inside XPP, use File -> Read set with the included set files to get
certain dynamics from the paper:

OneCellTwoOsc.ode.setsb <-> the paper's Fig. 2a,
<img src="./fig2a.png" alt="fig 2a">

OneCellTwoOsc.ode.setdb <-> the paper's Fig. 2b,
<img src="./fig2b.png" alt="fig 2b">

OneCellTwoOsc.ode.setsdb <-> the paper's Fig. 2c
<img src="./fig2c.png" alt="fig 2c">

</pre></html>