diff --git a/PQAnalysis/cli/gen2xyz.py b/PQAnalysis/cli/gen2xyz.py index 216b4d1e..8f86d360 100644 --- a/PQAnalysis/cli/gen2xyz.py +++ b/PQAnalysis/cli/gen2xyz.py @@ -69,6 +69,7 @@ def add_arguments(cls, parser: _ArgumentParser) -> None: parser.add_argument( '--nobox', action='store_true', + default=False, help='Do not print the box.' ) diff --git a/PQAnalysis/cli/rst2xyz.py b/PQAnalysis/cli/rst2xyz.py index 89599699..fc99aa65 100644 --- a/PQAnalysis/cli/rst2xyz.py +++ b/PQAnalysis/cli/rst2xyz.py @@ -69,6 +69,7 @@ def add_arguments(cls, parser: _ArgumentParser) -> None: parser.add_argument( '--nobox', action='store_true', + default=False, help='Do not print the box.' ) diff --git a/PQAnalysis/cli/traj2box.py b/PQAnalysis/cli/traj2box.py index 93cd7311..2b2bc3ae 100644 --- a/PQAnalysis/cli/traj2box.py +++ b/PQAnalysis/cli/traj2box.py @@ -74,6 +74,7 @@ def add_arguments(cls, parser: _ArgumentParser) -> None: parser.add_argument( '--vmd', action='store_true', + default=False, help='Output in VMD format.' )