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Adding download py-file
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SGenheden committed Mar 14, 2024
1 parent 87b3675 commit b81e5f6
Showing 1 changed file with 4 additions and 28 deletions.
32 changes: 4 additions & 28 deletions examples/route-efficiency/paroutes-analysis.ipynb
Original file line number Diff line number Diff line change
Expand Up @@ -14,38 +14,14 @@
},
{
"cell_type": "code",
"execution_count": 1,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Requirement already satisfied: reaction-utils in /projects/mai/users/sgenheden/miniconda/envs/rxn-env/lib/python3.8/site-packages (0.0.1)\n",
"Collecting rdchiral@ git+https://github.com/connorcoley/rdchiral.git@master\n",
" Cloning https://github.com/connorcoley/rdchiral.git (to revision master) to /scratch/kpzn768/pip-install-ni8guwwj/rdchiral_29c467ec6d094df59508ec64de80b753\n",
" Running command git clone -q https://github.com/connorcoley/rdchiral.git /scratch/kpzn768/pip-install-ni8guwwj/rdchiral_29c467ec6d094df59508ec64de80b753\n",
"^C\n",
"\u001b[31mERROR: Operation cancelled by user\u001b[0m\n",
"--2024-03-14 10:19:21-- https://zenodo.org/record/7341155/files/ref_routes_n1.json?download=1\n",
"Resolving proxy.srv.scp (proxy.srv.scp)... 10.96.66.4\n",
"Connecting to proxy.srv.scp (proxy.srv.scp)|10.96.66.4|:3128... connected.\n",
"Proxy request sent, awaiting response... 301 MOVED PERMANENTLY\n",
"Location: /records/7341155/files/ref_routes_n1.json [following]\n",
"--2024-03-14 10:19:22-- https://zenodo.org/records/7341155/files/ref_routes_n1.json\n",
"Connecting to proxy.srv.scp (proxy.srv.scp)|10.96.66.4|:3128... connected.\n",
"Proxy request sent, awaiting response... 200 OK\n",
"Length: 64187987 (61M) [text/plain]\n",
"Saving to: ‘ref_routes_n1.json’\n",
"\n",
" 3% [> ] 2,224,591 228KB/s eta 5m 14s "
]
}
],
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"#@title Installation -- Run this cell to install rnxutils\n",
"\n",
"!pip install reaction-utils\n",
"!wget https://raw.githubusercontent.com/MolecularAI/reaction_utils/route-efficiency-notebook/examples/route-efficiency/complexity.py -O complexity.py\n",
"!wget https://zenodo.org/record/7341155/files/ref_routes_n1.json?download=1 -O ref_routes_n1.json"
]
},
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