Releases: Molmed/snpseq-archive-verify
Releases · Molmed/snpseq-archive-verify
v1.2.1
v1.2.1-rc1 return valid Arteria states
What's Changed
Full Changelog: v1.1.2...v1.2.1-rc1
Contributors
b97pla
Assets 2
Download endpoint, pip deployment, docker file
Contributors
b97pla
Assets 2
Updated dependencies, download endpoint
What's Changed
- switched to pyproject.toml, update rq and dependencies by @b97pla in #8
- Download option by @b97pla in #9
Full Changelog: v1.0.5-rc1...v1.1.0-rc1
Contributors
b97pla
Assets 2
Update vulnerable packages and mock Redis in test environment
Merge pull request #6 from Molmed/DEVELOP-1339-fix-security-advisory WIP: Develop 1339 - update app to run on Python 3.6
Update python version to 3.6
- Pin python version to 3.6
- Update several other packages
Post-verification Cleanup
This release contains the following features:
- files downloaded from PDC are deleted after they have been successfully verified
- the downloading of an archive from PDC can be mocked, allowing the bypassing of dsmc commands. This in turn allows the md5 validation of a locally available archive in environments where dsmc is not available, e.g. a development environment
Better error messages
This release brings more informative error messages.
Option to supply full path to PDC archive
Minor changes:
- An optional parameter "path" is introduced to the service which, if specified, will be used as the full path to the PDC archive, rather than constructing it from the host and archive parameters
Initial release
A self contained (aiohttp) REST service that helps verify uploaded SNP&SEQ archives by first downloading the archive from PDC, and then compare the MD5 sums for all associated files.
The web service enqueues certain job functions in the RQ/Redis queue, where they get picked up by the separate RQ worker process.