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@MonashBioinformaticsPlatform

Monash Bioinformatics Platform

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  1. RSeQC RSeQC Public

    fork of RSeQC python RNAseq metrics suit of tools

    Python 46 18

  2. LFQ-Analyst LFQ-Analyst Public

    The repo for LFQ-Analyst

    HTML 28 13

  3. bio-ansible bio-ansible Public

    Proof of concept to use ansible + Lmod to deploy a bioinformatics server

    Jinja 23 16

  4. varistran varistran Public

    R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data

    R 19 3

  5. celaref celaref Public

    R 14 2

  6. RNAsik-pipe RNAsik-pipe Public

    RNAsik - more than just a pipeline

    TeX 13 5

Repositories

Showing 10 of 87 repositories
  • Functional_Enrichment_BioCommons_2024 Public

    Materials and resources for a 2-day workshop on functional enrichment analysis, organised by Australian BioCommons and delivered by Monash University and the University of Sydney.

    MonashBioinformaticsPlatform/Functional_Enrichment_BioCommons_2024’s past year of commit activity
    HTML 1 1 0 0 Updated Nov 20, 2024
  • r-intro-resbazvic2024 Public Forked from MonashDataFluency/r-intro-2

    Introduction to R workshop material for ResBaz Victoria 2024

    MonashBioinformaticsPlatform/r-intro-resbazvic2024’s past year of commit activity
    R 0 14 0 0 Updated Nov 19, 2024
  • RNAseq_workshop_2024 Public
    MonashBioinformaticsPlatform/RNAseq_workshop_2024’s past year of commit activity
    HTML 1 0 0 0 Updated Nov 12, 2024
  • VEPvcf_parser Public
    MonashBioinformaticsPlatform/VEPvcf_parser’s past year of commit activity
    R 0 0 0 0 Updated Nov 12, 2024
  • scRNAseq_Workshop_ABACBS_2024 Public

    Single cell RNAseq workshop for ABACBS 2024

    MonashBioinformaticsPlatform/scRNAseq_Workshop_ABACBS_2024’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 11, 2024
  • laxy Public

    Laxy Genomics Pipelines

    MonashBioinformaticsPlatform/laxy’s past year of commit activity
    Python 3 Apache-2.0 1 67 (8 issues need help) 0 Updated Oct 24, 2024
  • rocker-ultra Public

    Containerised RStudio with bells+whistles for HPC and everywhere

    MonashBioinformaticsPlatform/rocker-ultra’s past year of commit activity
    Dockerfile 3 GPL-2.0 2 2 0 Updated Oct 22, 2024
  • polyApipe Public

    polyApipe

    MonashBioinformaticsPlatform/polyApipe’s past year of commit activity
    R 12 LGPL-2.1 6 5 0 Updated Oct 14, 2024
  • learning-resource-links Public

    An awesome list of learning resources for bioinformatics, genomics and computational biology

    MonashBioinformaticsPlatform/learning-resource-links’s past year of commit activity
    13 4 0 0 Updated Oct 9, 2024
  • provean Public archive

    Fork of Provean tool from : http://provean.jcvi.org

    MonashBioinformaticsPlatform/provean’s past year of commit activity
    C++ 7 2 0 0 Updated Aug 13, 2024
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