Support the preparation of a scientific journal article for submission by providing space for thinking and planning the manuscript rather than doing this in the margins of the manuscript document.
A type-setting program built on top of the programming language Rust. It compiles small documents almost instantly, so it can be used interactively. The typst.app is analogous to Overleaf in the LaTeX world.
- table of contents
- Project initiation metadata
- Project management metadata
- Daily log
- To dos
- Future off-shoots
- Protocols
- List of typst links
- index
- bibliography
- single- and double-spacing
- running title in header
- 1/N page numbering
- BibLaTeX
- typst source file template
- biblatex file
- sample PDF
- wordcount.csv
- typst version 0.11.0 or more recent
- in-dexter v0.6.0
- cheq v0.2.0
Store in .bashrc
or .zshrc
.
Edit file paths to suit.
Two functions are provided, so you do not have to remember the order of the component names in the function name.
function typlog {
echo "Copy template writing log in typst with project number in title."
if [ $# -lt 1 ]; then
echo 1>&2 "$0: not enough arguments"
echo "Usage1: typlog projectID"
return 2
elif [ $# -gt 1 ]; then
echo 1>&2 "$0: too many arguments"
echo "Usage1: typlog projectID"
return 2
fi
projectID="$1"
echo "Write writing log to log$1.typ file."
cp ~/6112MooersLabGitHubLabRepos/writingLogInTypst/logTemplate.org log$1.typ
cp ~/6112MooersLabGitHubLabRepos/writingLogTemplateInTypst/wordcount.csv .
cp ~/6112MooersLabGitHubLabRepos/writingLogTemplateInTypst/template.bib $1.bib
}
function logtyp {
echo "Copy template writing log in typst with project number in title."
if [ $# -lt 1 ]; then
echo 1>&2 "$0: not enough arguments"
echo "Usage1: logtyp projectID"
return 2
elif [ $# -gt 1 ]; then
echo 1>&2 "$0: too many arguments"
echo "Usage1: logtyp projectID"
return 2
fi
projectID="$1"
echo "Write writing log to log$1.typ file."
cp ~/6112MooersLabGitHubLabRepos/writingLogInTypst/logTemplate.org log$1.typ
cp ~/6112MooersLabGitHubLabRepos/writingLogTemplateInTypst/wordcount.csv .
cp ~/6112MooersLabGitHubLabRepos/writingLogTemplateInTypst/template.bib $1.bib
}
Version | Changes | Date |
---|---|---|
Version 0.1 | Initiate project. Added badges, funding, and update table. | 2024 October 11 |
- NIH: R01 CA242845
- NIH: R01 AI088011
- NIH: P30 CA225520 (PI: R. Mannel)
- NIH: P20 GM103640 and P30 GM145423 (PI: A. West)