Small wrapper for dcm2bids by @cbedetti for converting dicoms acquired by the
POND and KIND studies to BIDS. Based on work by Michael Joseph (@josephmje).
To use, clone this repository and create a python virtual environment in
the repository top level directory and install the requirements listed in
requirements.txt, then put the <repo>/bin directory on your path to
use dcm2bids_conversion. Example usage:
dcm2bids_conversion \
-d SPReD \
-b Queens_BIDS/ \
-c POND-config.json \
-g "PND03*MR" \
-sr 'QNS_[0-9][0-9][0-9][0-9]' \
-vr "_([0-9][0-9])_" \
-ps "QNS" "394" \
-psg "_" ""