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FEATURE: ROI registration and interpretation of #1116

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eunjoy21 opened this issue Apr 17, 2024 · 1 comment
Open

FEATURE: ROI registration and interpretation of #1116

eunjoy21 opened this issue Apr 17, 2024 · 1 comment

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@eunjoy21
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Feature you'd like to see:

My first question is: when the plot data is exported to csv file after choosing an activity mode, I found the last column containing negative values in all csv files. Could you explain what those negative values mean and how it was calculated?

Also, it looks like there is a kind of sequence, like 3, 2.5, 2, and so on. Could you explain why? I've attached an image showing what I found in a csv file.

My last question is, I would like to track the same cells over time. Is there any function that I can register or save the ROI from one image and use it to another image by uploading the previous ROI?

Suite2p_csv_screencapture

Attempted alternative approaches:

I already tried using the classifier function, but it didn't work.

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@RichieHakim
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For tracking ROIs over multiple sessions: https://github.com/RichieHakim/ROICaT

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