local-beacon-list.yaml

beacons:
  - url: https://kba.ncats.io/beacon/semmeddb
    name: SemMedDB
    description: Reference Knowledge Beacon implementation indexed by Wikidata
    wraps: an internally (private subnet accessed) NCATS Neo4j database server populated with Semantic Medline Database
    repo: https://github.com/NCATS-Tangerine/tkg-beacon
    contact: Richard Bruskiewich
    status: deployed
  - url: https://kba.ncats.io/beacon/biolink
    name: Monarch Biolink
    description: Wraps Monarch biolink API
    wraps: https://api.monarchinitiative.org/api/
    contact: Lance Hannestad or Richard Bruskiewich
    status: deployed
    repo: https://github.com/NCATS-Tangerine/biolink-beacon
  - url: https://kba.ncats.io/beacon/hmdb-knowledge-beacon
    name: HMDB
    description: wraps Human Metabolome Database
    wraps: http://www.hmdb.ca/
    repo: https://github.com/NCATS-Tangerine/HMDB-knowledge-beacon
    contact: Vlado Dancik (vdancik, team indigo)
    status: deployed
  - url: https://kba.ncats.io/beacon/rhea
    name: Rhea
    description: the annotated database of biochemical reactions
    wraps: https://www.rhea-db.org/
    repo: https://github.com/NCATS-Tangerine/rhea-beacon
    contact: Lance Hannestad
    status: deployed
  - url: https://kba.ncats.io/beacon/smpdb
    name: Rhea
    description: the annotated database of small molecular pathways
    wraps: https://smpdb.ca/
    repo: https://github.com/NCATS-Tangerine/smpdb-beacon
    contact: Lance Hannestad
    status: deployed
  - url: https://kba.ncats.io/beacon/ndex
    name: nDex Bio
    description: Knowledge Beacon wrapper for ndexbio.org
    wraps: http://ndexbio.org
    repo: https://github.com/NCATS-Tangerine/ndex-beacon
    contact: Richard Bruskiewich (formerly Meera Godden (meera-gd))
    status: deployed