Bugfix for where some fields are not in the input increment file #164
Workflow file for this run
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| name: GCC Linux Build | |
| on: [push, pull_request] | |
| # Use custom shell with -l so .bash_profile is sourced | |
| # without having to do it in manually every step | |
| defaults: | |
| run: | |
| shell: bash -leo pipefail {0} | |
| env: | |
| cache_key: gcc | |
| CC: gcc-10 | |
| FC: gfortran-10 | |
| CXX: g++-10 | |
| # A note on flushing Action cache and relevance to "cache_key" above. | |
| # There is no way to flush the Action cache, and hence a number (#) is appended | |
| # to the "cache_key" (gcc). | |
| # If the dependencies change, increment this number and a new cache will be | |
| # generated by the dependency build step "setup" | |
| # There is a Github issue to force clear the cache. | |
| # See discussion on: | |
| # https://stackoverflow.com/questions/63521430/clear-cache-in-github-actions | |
| # The jobs are split into: | |
| # 1. a dependency build step (setup), and | |
| # 2. a GSI-utils build step (gsi-utils) | |
| # The setup is run once and the environment is cached, | |
| # so each subsequent build of GSI-utils can reuse the cached dependencies to save time (and compute). | |
| jobs: | |
| setup: | |
| runs-on: ubuntu-latest | |
| steps: | |
| # Free up disk space | |
| - name: free-disk-spack | |
| run: | | |
| df -h | |
| sudo swapoff -a | |
| sudo rm -rf /swapfile | |
| sudo rm -rf /usr/share/dotnet | |
| sudo rm -rf /opt/ghc | |
| sudo rm -rf "/usr/local/share/boost" | |
| sudo rm -rf "$AGENT_TOOLSDIRECTORY" | |
| sudo apt clean | |
| docker rmi $(docker image ls -aq) | |
| df -h | |
| - name: checkout # This is for getting spack.yaml | |
| if: steps.cache-env.outputs.cache-hit != 'true' | |
| uses: actions/checkout@v4 | |
| with: | |
| path: gsi-utils | |
| # Cache spack, compiler and dependencies | |
| - name: cache-env | |
| id: cache-env | |
| uses: actions/cache@v3 | |
| with: | |
| path: | | |
| spack | |
| ~/.spack | |
| key: spack-${{ runner.os }}-${{ env.cache_key }}-${{ hashFiles('gsi-utils/ci/spack.yaml') }} | |
| # Install dependencies using Spack | |
| - name: install-dependencies-with-spack | |
| if: steps.cache-env.outputs.cache-hit != 'true' | |
| run: | | |
| git clone -c feature.manyFiles=true https://github.com/JCSDA/spack.git | |
| source spack/share/spack/setup-env.sh | |
| spack env create gsiutils-env gsi-utils/ci/spack.yaml | |
| spack env activate gsiutils-env | |
| spack compiler find | |
| sudo apt install cmake | |
| spack external find | |
| spack add mpich@3.4.2 | |
| spack concretize | |
| spack install -v --fail-fast --dirty | |
| spack clean --all | |
| gsi-utils: | |
| needs: setup | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| path: gsi-utils | |
| - name: cache-env | |
| id: cache-env | |
| uses: actions/cache@v3 | |
| with: | |
| path: | | |
| spack | |
| ~/.spack | |
| key: spack-${{ runner.os }}-${{ env.cache_key }}-${{ hashFiles('gsi-utils/ci/spack.yaml') }} | |
| - name: build | |
| run: | | |
| source spack/share/spack/setup-env.sh | |
| spack env activate gsiutils-env | |
| cd gsi-utils | |
| mkdir -p build && cd build | |
| cmake -DCMAKE_INSTALL_PREFIX=../install -DBUILD_UTIL_ALL=ON .. | |
| make -j2 VERBOSE=1 | |
| make install | |
| env: | |
| CC: mpicc | |
| FC: mpif90 |