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Makefile
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Makefile
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SHELL := /bin/bash
include docker/Makefile.image_names
include Makefile.data_download
ROOT_DIR:=$(shell dirname $(realpath $(firstword $(MAKEFILE_LIST))))
define BROWSER_PYSCRIPT
import os, webbrowser, sys
try:
from urllib import pathname2url
except:
from urllib.request import pathname2url
webbrowser.open("file://" + pathname2url(os.path.abspath(sys.argv[1])))
endef
export BROWSER_PYSCRIPT
BROWSER := python -c "$$BROWSER_PYSCRIPT"
DOCKER_BUILDKIT=1
SHELL=/bin/bash
CWD=$(shell pwd)
CMD ?=bash
PULL ?=True
DEV ?=y
CHECK_CHANGED_SCRIPT=$(CWD)/changed_from_main.py
CONTAINER_CMD?=docker
SAVEPOINT_SETUP=pip3 list
PORT ?=8888
APP_NAME ?=Pace_dev
VOLUMES ?=
BUILD_FLAGS ?=
### Testing variables
RUN_FLAGS ?=--rm
ifeq ("$(CONTAINER_CMD)","")
PACE_PATH?=$(ROOT_DIR)
else
ifeq ("$(CONTAINER_CMD)","srun")
PACE_PATH?=$(ROOT_DIR)
else
PACE_PATH?=/pace
endif
endif
ifeq ("$(CONTAINER_CMD)","")
EXPERIMENT_DATA_RUN=$(EXPERIMENT_DATA)
else
ifeq ("$(CONTAINER_CMD)","srun")
EXPERIMENT_DATA_RUN=$(EXPERIMENT_DATA)
else
EXPERIMENT_DATA_RUN=$(PACE_PATH)/test_data/$(FORTRAN_SERIALIZED_DATA_VERSION)/$(EXPERIMENT)
endif
endif
ifeq ($(DEV),y)
VOLUMES += -v $(ROOT_DIR):/pace
else
VOLUMES += -v $(EXPERIMENT_DATA):$(EXPERIMENT_DATA_RUN)
endif
ifeq ($(CONTAINER_CMD),docker)
CONTAINER_FLAGS=run $(RUN_FLAGS) $(VOLUMES) --env GT_CACHE_ROOT=/pace/.gt_cache $(PACE_IMAGE)
else
CONTAINER_FLAGS=
endif
NUM_RANKS ?=6
MPIRUN_ARGS ?=--oversubscribe --mca btl_vader_single_copy_mechanism none
MPIRUN_CALL ?=mpirun -np $(NUM_RANKS) $(MPIRUN_ARGS)
TEST_ARGS ?=-v
TEST_TYPE=$(word 3, $(subst _, ,$(EXPERIMENT)))
FV3CORE_THRESH_ARGS=--threshold_overrides_file=$(PACE_PATH)/fv3core/tests/savepoint/translate/overrides/$(TEST_TYPE).yaml
PHYSICS_THRESH_ARGS=--threshold_overrides_file=$(PACE_PATH)/physics/tests/savepoint/translate/overrides/$(TEST_TYPE).yaml
###
build:
ifneq ($(findstring docker,$(CONTAINER_CMD)),) # only build if using docker
ifeq ($(DEV),n) # rebuild container if not running in dev mode
$(MAKE) _force_build
else # build even if running in dev mode if there is no environment image
ifeq ($(shell docker images -q us.gcr.io/vcm-ml/pace 2> /dev/null),)
$(MAKE) _force_build
endif
endif
endif
_force_build:
DOCKER_BUILDKIT=1 docker build \
$(BUILD_FLAGS) \
-f $(CWD)/Dockerfile \
-t $(PACE_IMAGE) \
.
enter:
docker run --rm -it \
$(VOLUMES) \
-p=$(PORT):$(PORT) \
--name="$(APP_NAME)" \
$(PACE_IMAGE) $(CMD)
dev:
DEV=y $(MAKE) enter
notebook:
CMD="jupyter notebook --ip 0.0.0.0 --no-browser --allow-root --notebook-dir=/pace/examples/notebooks" \
DEV=y \
$(MAKE) enter
test_util:
if [ $(shell $(CHECK_CHANGED_SCRIPT) util) != false ]; then \
$(MAKE) -C util test; \
fi
savepoint_tests: build ## dycore-only savepoint tests
TARGET=dycore $(MAKE) get_test_data
$(CONTAINER_CMD) $(CONTAINER_FLAGS) bash -c "$(SAVEPOINT_SETUP) && cd $(PACE_PATH) && pytest --data_path=$(EXPERIMENT_DATA_RUN)/dycore/ $(TEST_ARGS) $(FV3CORE_THRESH_ARGS) $(PACE_PATH)/fv3core/tests/savepoint"
savepoint_tests_mpi: build
TARGET=dycore $(MAKE) get_test_data
$(CONTAINER_CMD) $(CONTAINER_FLAGS) bash -c "$(SAVEPOINT_SETUP) && cd $(PACE_PATH) && $(MPIRUN_CALL) python3 -m mpi4py -m pytest --maxfail=1 --data_path=$(EXPERIMENT_DATA_RUN)/dycore/ $(TEST_ARGS) $(FV3CORE_THRESH_ARGS) -m parallel $(PACE_PATH)/fv3core/tests/savepoint"
dependencies.svg: dependencies.dot
dot -Tsvg $< -o $@
.PHONY: constraints.txt
constraints.txt: driver/setup.py ndsl/setup.py pyFV3/setup.py pySHiELD/setup.py requirements_docs.txt requirements_lint.txt external/gt4py/setup.cfg requirements_dev.txt
pip-compile $^ --output-file constraints.txt
sed -i.bak '/\@ git+https/d' constraints.txt
rm -f constraints.txt.bak
physics_savepoint_tests: build
TARGET=physics $(MAKE) get_test_data
$(CONTAINER_CMD) $(CONTAINER_FLAGS) bash -c "$(SAVEPOINT_SETUP) && cd $(PACE_PATH) && pytest --data_path=$(EXPERIMENT_DATA_RUN)/physics/ $(TEST_ARGS) $(PHYSICS_THRESH_ARGS) $(PACE_PATH)/physics/tests/savepoint"
physics_savepoint_tests_mpi: build
TARGET=physics $(MAKE) get_test_data
$(CONTAINER_CMD) $(CONTAINER_FLAGS) bash -c "$(SAVEPOINT_SETUP) && cd $(PACE_PATH) && $(MPIRUN_CALL) python -m mpi4py -m pytest --maxfail=1 --data_path=$(EXPERIMENT_DATA_RUN)/physics/ $(TEST_ARGS) $(PHYSICS_THRESH_ARGS) -m parallel $(PACE_PATH)/physics/tests/savepoint"
test_main: build
$(CONTAINER_CMD) $(CONTAINER_FLAGS) bash -c "$(SAVEPOINT_SETUP) && cd $(PACE_PATH) && pytest $(TEST_ARGS) $(PACE_PATH)/tests/main"
test_savepoint: ## top level savepoint tests
TARGET=dycore $(MAKE) get_test_data
$(CONTAINER_CMD) $(CONTAINER_FLAGS) bash -c "$(SAVEPOINT_SETUP) && cd $(PACE_PATH) && $(MPIRUN_CALL) python -m pytest --data_path=$(EXPERIMENT_DATA_RUN)/dycore/ $(TEST_ARGS) $(PACE_PATH)/tests/savepoint"
test_notebooks: ## tests for jupyter notebooks, must be run in correct Python environment
pytest --nbmake "examples/notebooks"
test_mpi_54rank:
mpirun -n 54 $(MPIRUN_ARGS) python3 -m mpi4py -m pytest tests/mpi_54rank
driver_savepoint_tests_mpi: build
TARGET=pace $(MAKE) get_test_data
$(CONTAINER_CMD) $(CONTAINER_FLAGS) bash -c "$(SAVEPOINT_SETUP) && cd $(PACE_PATH) && $(MPIRUN_CALL) python -m mpi4py -m pytest --maxfail=1 --data_path=$(EXPERIMENT_DATA_RUN)/pace/ $(TEST_ARGS) $(PHYSICS_THRESH_ARGS) -m parallel $(PACE_PATH)/physics/tests/savepoint"
docs: ## generate Sphinx HTML documentation
$(MAKE) -C docs html
$(BROWSER) docs/_build/html/index.html
doctest: ## run Sphinx doctest
$(MAKE) -C docs doctest
servedocs: docs ## compile the docs watching for changes
watchmedo shell-command -p '*.rst' -c '$(MAKE) -C docs html' -R -D .
lint:
pre-commit run --all-files
.PHONY: docs doctest servedocs build