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GNPS2 results not supported #284

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dora-ferreira opened this issue Nov 14, 2024 · 3 comments
Open

GNPS2 results not supported #284

dora-ferreira opened this issue Nov 14, 2024 · 3 comments

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@dora-ferreira
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Output files from molecular networks generated by GNPS2 (https://gnps2.org/homepage) are not yet accepted by NPLinker. Support should be added for classic (https://wang-bioinformatics-lab.github.io/GNPS2_Documentation/classical/) and feature-based (https://wang-bioinformatics-lab.github.io/GNPS2_Documentation/fbmn/) molecular networking workflows.

@github-project-automation github-project-automation bot moved this to Backlog in dev Nov 14, 2024
@CunliangGeng
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@dora-ferreira @justinjjvanderhooft Hi, could you provide the link of example output for each of GNPS2 workflows? With these example data, I could have a look how to support them in NPLinker.

@CunliangGeng CunliangGeng moved this from Backlog to Ready in dev Dec 5, 2024
@justinjjvanderhooft
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@dora-ferreira could you share through here or Slack some links? Mine are pretty dated now, and I suspect things may have changed since then.

@dora-ferreira
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@CunliangGeng @justinjjvanderhooft Sure, I sent them on Slack!

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