[fix] Fix for failing healpix dataloader test

examples/cfd/external_aerodynamics/domino/README.md

@@ -0,0 +1,15 @@
+# DoMINO: Decomposable Multi-scale Iterative Neural Operator for External Aerodynamics
+
+DoMINO is a local, multi-scale, point-cloud based model architecture to model large-scale
+physics problems such as external aerodynamics. The DoMINO model architecture takes STL
+geometries as input and evaluates flow quantities such as pressure and
+wall shear stress on the surface of the car as well as velocity fields and pressure
+in the volume around it. The DoMINO architecture is designed to be a fast, accurate
+and scalable surrogate model for large-scale simulations.
+
+The DoMINO model architecture is used to support the Real Time Wind Tunnel OV Blueprint
+demo presented at Supercomputing' 24.
+
+![Results from DoMINO for RTWT SC demo](../../../../docs/img/domino_result_rtwt.jpg)
+
+More details on the model architecture and reference pipeline will be released soon.

examples/generative/diffusion/README.md

@@ -30,7 +30,7 @@ Datasets used for model training and sampling can be downloaded via the followin
 ## Running the Experiments
 Download the high res and low res data and save the data files to the subdirectory ``modulus/examples/generative/diffusion/Kolmogorov_2D_data/``.
 
-- Note: The directory from which the downloaded dataset files are loaded is specified in the configuration yaml files at ``modulus/examples/generative/diffusion/Kolmogorov_2D_data/conf/``. In the case when the default relative file location in a yaml file cannot be correctly recognized, please replace the relative location with the absolute location. For example, in the configuration file "modulus/examples/generative/diffusion/Kolmogorov_2D_data/conf/config_dfsr_train.yaml", Line 24, the value of the key 'data' can be changed to an absolute file directory of the dataset file, e.g., ``/<directory of modulus>/examples/generative/diffusion/Kolmogorov_2D_data/kf_2d_re1000_256_40seed.npy``
+- Note: The directory from which the downloaded dataset files are loaded is specified in the configuration yaml files at ``modulus/examples/generative/diffusion/conf/``. In the case when the default relative file location in a yaml file cannot be correctly recognized, please replace the relative location with the absolute location. For example, in the configuration file `modulus/examples/generative/diffusion/conf/config_dfsr_train.yaml`, Line 24, the value of the key 'data' can be changed to an absolute file directory of the dataset file, e.g., ``/<directory of modulus>/examples/generative/diffusion/Kolmogorov_2D_data/kf_2d_re1000_256_40seed.npy``
 
 <b>Step 1 - Model Training</b>
 

modulus/datapipes/healpix/data_modules.py

@@ -285,7 +285,7 @@ def create_time_series_dataset_classic(
     for variable in all_variables:
         file_name = _get_file_name(src_directory, prefix, variable, suffix)
         logger.debug("open nc dataset %s", file_name)
-        if "sample" in list(xr.open_dataset(file_name).dims.keys()):
+        if "sample" in list(xr.open_dataset(file_name).sizes.keys()):
             ds = xr.open_dataset(file_name, chunks={"sample": batch_size}).rename(
                 {"sample": "time"}
             )
@@ -989,7 +989,7 @@ def setup(self) -> None:
                 )
 
                 dataset = dataset.sel(
-                    channel_in=self.input_variables,
+                    channel_in=self.input_variables + coupled_variables,
                     channel_out=self.output_variables,
                 )
             else:

modulus/datapipes/healpix/timeseries_dataset.py

@@ -303,8 +303,8 @@ def _get_time_index(self, item):
             if self.forecast_mode
             else (item + 1) * self.batch_size + self._window_length
         )
-        if not self.drop_last and max_index > self.ds.dims["time"]:
-            batch_size = self.batch_size - (max_index - self.ds.dims["time"])
+        if not self.drop_last and max_index > self.ds.sizes["time"]:
+            batch_size = self.batch_size - (max_index - self.ds.sizes["time"])
         else:
             batch_size = self.batch_size
         return (start_index, max_index), batch_size

test/models/dlwp_healpix/test_healpix_layers.py

@@ -154,38 +154,34 @@ def test_HEALPixLayer_initialization(device, multiplier):
 def test_HEALPixLayer_forward(device, multiplier):
     layer = HEALPixLayer(layer=MulX, multiplier=multiplier)
 
+    kernel_size = 3
+    dilation = 2
+    in_channels = 4
+    out_channels = 8
+
     tensor_size = torch.randint(low=2, high=4, size=(1,)).tolist()
-    tensor_size = [24, 4, *tensor_size, *tensor_size]
+    tensor_size = [24, in_channels, *tensor_size, *tensor_size]
     invar = torch.rand(tensor_size, device=device)
     outvar = layer(invar)
 
     assert common.compare_output(outvar, invar * multiplier)
 
-    # test nhwc mode and dilation
     layer = HEALPixLayer(
         layer=torch.nn.Conv2d,
-        in_channels=4,
-        out_channels=8,
-        kernel_size=3,
+        in_channels=in_channels,
+        out_channels=out_channels,
+        kernel_size=kernel_size,
         device=device,
-        # dilation=4,
-    )
-
-    outvar = layer(invar)
-
-    layer = HEALPixLayer(
-        layer=torch.nn.Conv2d,
-        in_channels=4,
-        out_channels=8,
-        kernel_size=3,
-        device=device,
-        dilation=1,
+        dilation=dilation,
         enable_healpixpad=True,
         enable_nhwc=True,
     )
 
-    assert outvar.shape == layer(invar).shape
-    assert outvar.stride() != layer(invar).stride()
+    # size of the padding added byu HEALPixLayer
+    expected_shape = [24, out_channels, tensor_size[-1], tensor_size[-1]]
+    expected_shape = torch.Size(expected_shape)
+
+    assert expected_shape == layer(invar).shape
 
     del layer, outvar, invar
     torch.cuda.empty_cache()