diff --git a/README.md b/README.md index 8aa4304..63eb9d8 100644 --- a/README.md +++ b/README.md @@ -1,27 +1,24 @@ # cytounet: Deep Learning Based Cell Segmentation +[![PyPI version](https://badge.fury.io/py/cytounet.svg)](https://badge.fury.io/py/cytounet) [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.3928919.svg)](https://doi.org/10.5281/zenodo.3928919) -![Stage](https://www.repostatus.org/badges/latest/active.svg) -[![Documentation Status](https://readthedocs.org/projects/cytounet/badge/?version=latest)](https://cytounet.readthedocs.io/en/latest/?badge=latest) +![Stage](https://www.repostatus.org/badges/latest/active.svg) ![Test Install](https://github.com/Nelson-Gon/cytounet/workflows/Test%20Install/badge.svg) -[![PyPI version](https://badge.fury.io/py/cytounet.svg)](https://badge.fury.io/py/cytounet) -[![PyPI Downloads Month](https://img.shields.io/pypi/dm/cytounet.svg)](https://pypi.python.org/pypi/cytounet/) -[![PyPI license](https://img.shields.io/pypi/l/cytounet.svg)](https://pypi.python.org/pypi/cytounet/) ![Travis Build](https://travis-ci.com/Nelson-Gon/cytounet.svg?branch=master) +[![PyPI license](https://img.shields.io/pypi/l/cytounet.svg)](https://pypi.python.org/pypi/cytounet/) +[![Documentation Status](https://readthedocs.org/projects/cytounet/badge/?version=latest)](https://cytounet.readthedocs.io/en/latest/?badge=latest) +[![PyPI Downloads Month](https://img.shields.io/pypi/dm/cytounet.svg)](https://pypi.python.org/pypi/cytounet/) [![Maintenance](https://img.shields.io/badge/Maintained%3F-yes-green.svg)](https://GitHub.com/Nelson-Gon/cytounet/graphs/commit-activity) [![GitHub last commit](https://img.shields.io/github/last-commit/Nelson-Gon/cytounet.svg)](https://github.com/Nelson-Gon/cytounet/commits/master) [![GitHub issues](https://img.shields.io/github/issues/Nelson-Gon/cytounet.svg)](https://GitHub.com/Nelson-Gon/cytounet/issues/) [![GitHub issues-closed](https://img.shields.io/github/issues-closed/Nelson-Gon/cytounet.svg)](https://GitHub.com/Nelson-Gon/cytounet/issues?q=is%3Aissue+is%3Aclosed) ---- - - **Background** ![Project Workflow](https://github.com/Nelson-Gon/cytounet/blob/master/examples/project_workflow.png?raw=true) -This project was largely done as a summer intern in Dr. Mikael [Bjorklund](https://person.zju.edu.cn/en/H118035)'s lab, +This project was largely done as a summer 2020 intern in Dr. Mikael [Bjorklund](https://person.zju.edu.cn/en/H118035)'s lab, whose guidance, resources, and time I am grateful for. The aim was to automate [a549](https://en.wikipedia.org/wiki/A549_cell) and [rpe](https://en.wikipedia.org/wiki/Retinal_pigment_epithelium) diff --git a/docs/source/README.rst b/docs/source/README.rst index a583a7e..ea21852 100644 --- a/docs/source/README.rst +++ b/docs/source/README.rst @@ -3,6 +3,11 @@ cytounet: Deep Learning Based Cell Segmentation =============================================== +.. image:: https://badge.fury.io/py/cytounet.svg + :target: https://badge.fury.io/py/cytounet + :alt: PyPI version + + .. image:: https://zenodo.org/badge/DOI/10.5281/zenodo.3928919.svg :target: https://doi.org/10.5281/zenodo.3928919 :alt: DOI @@ -11,11 +16,6 @@ cytounet: Deep Learning Based Cell Segmentation .. image:: https://www.repostatus.org/badges/latest/active.svg :target: https://www.repostatus.org/badges/latest/active.svg :alt: Stage - - -.. image:: https://readthedocs.org/projects/cytounet/badge/?version=latest - :target: https://cytounet.readthedocs.io/en/latest/?badge=latest - :alt: Documentation Status .. image:: https://github.com/Nelson-Gon/cytounet/workflows/Test%20Install/badge.svg @@ -23,14 +23,9 @@ cytounet: Deep Learning Based Cell Segmentation :alt: Test Install -.. image:: https://badge.fury.io/py/cytounet.svg - :target: https://badge.fury.io/py/cytounet - :alt: PyPI version - - -.. image:: https://img.shields.io/pypi/dm/cytounet.svg - :target: https://pypi.python.org/pypi/cytounet/ - :alt: PyPI Downloads Month +.. image:: https://travis-ci.com/Nelson-Gon/cytounet.svg?branch=master + :target: https://travis-ci.com/Nelson-Gon/cytounet.svg?branch=master + :alt: Travis Build .. image:: https://img.shields.io/pypi/l/cytounet.svg @@ -38,9 +33,14 @@ cytounet: Deep Learning Based Cell Segmentation :alt: PyPI license -.. image:: https://travis-ci.com/Nelson-Gon/cytounet.svg?branch=master - :target: https://travis-ci.com/Nelson-Gon/cytounet.svg?branch=master - :alt: Travis Build +.. image:: https://readthedocs.org/projects/cytounet/badge/?version=latest + :target: https://cytounet.readthedocs.io/en/latest/?badge=latest + :alt: Documentation Status + + +.. image:: https://img.shields.io/pypi/dm/cytounet.svg + :target: https://pypi.python.org/pypi/cytounet/ + :alt: PyPI Downloads Month .. image:: https://img.shields.io/badge/Maintained%3F-yes-green.svg @@ -63,8 +63,6 @@ cytounet: Deep Learning Based Cell Segmentation :alt: GitHub issues-closed ----- - **Background** @@ -73,7 +71,7 @@ cytounet: Deep Learning Based Cell Segmentation :alt: Project Workflow -This project was largely done as a summer intern in Dr. Mikael `Bjorklund `_\ 's lab, +This project was largely done as a summer 2020 intern in Dr. Mikael `Bjorklund `_\ 's lab, whose guidance, resources, and time I am grateful for. The aim was to automate `a549 `_ and `rpe `_