ci.yml

name: Build all NML Java

on:
  push:
    branches: [ master, development, experimental, documentation_update, osb*, update* ]
  pull_request:
    branches: [ master, development, experimental, documentation_update, osb*, update* ]

jobs:
  build:
    runs-on: ubuntu-latest
    strategy:
      fail-fast: false
      matrix:
        java: [ '8', '11', '16', '17', '19', '21' ]

    steps:
    - uses: actions/checkout@v4

    - name: Set up JDK ${{ matrix.java }}
      uses: actions/setup-java@v4
      with:
        java-version: ${{ matrix.java }}
        java-package: jdk
        distribution: 'adopt'

    - name: Install NeuroML 2 with Maven
      run: |
        java -version
        mvn install

    - name: Install jNeuroML
      run: |
        export main_repo_branch=${GITHUB_REF##*/}
        if [[ ${main_repo_branch} != "master" && ${main_repo_branch} != "development" && ${main_repo_branch} != "experimental" && ${main_repo_branch} != *"osb"* ]]; then main_repo_branch=development ; fi
        echo Using branch $main_repo_branch
        git clone https://github.com/NeuroML/jNeuroML.git
        cd jNeuroML
        git checkout $main_repo_branch
        python getNeuroML.py $main_repo_branch  # will call mvn install on this & other repos
        ls -alt
        mvn dependency:tree
        ./jnml -v
        cd ..

    - name: Install OMV
      run: |
        pwd
        echo $GITHUB_WORKSPACE
        export PATH=$PATH:$GITHUB_WORKSPACE/jNeuroML
        export JNML_HOME=$GITHUB_WORKSPACE/jNeuroML
        pip install git+https://github.com/OpenSourceBrain/osb-model-validation
        omv list -V
        env
        pip freeze

    - name: Test examples using OMV
      run: |
        cd $GITHUB_WORKSPACE/NeuroML2/LEMSexamples
        omv all -V  --engine=jNeuroML --ignore-non-py3
        omv list -V