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Changes for NeuroML v2.3.1 release #120

Merged
merged 31 commits into from
Aug 20, 2024
Merged

Changes for NeuroML v2.3.1 release #120

merged 31 commits into from
Aug 20, 2024

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pgleeson
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pgleeson and others added 30 commits September 22, 2023 17:40
feat(nrnwriter): also handle ChannelDensityNonUniformNernst
Add functionality to save file outputs of sed-ml
netpyne: expose cvode bits from LEMS
Otherwise biosimulations errors;

```
Multiple objects have the following ids:\n      -
hhpop_0_bioPhys1_membraneProperties_KConductances_KConductance_n_q\n
- hhpop_0_bioPhys1_membraneProperties_NaConductances_NaConductance_h_q\n
  -
  hhpop_0_bioPhys1_membraneProperties_NaConductances_NaConductance_m_q\n
  - hhpop_0_v\n      - time""
```
Otherwise biosimulations errs with:

```
Multiple objects have the following ids:\n      - time
```
To v1.10.1; Adds support for external morphology/biophysProps in cell element for Neuron/NetPyNE
Check if cell is CELL_2CA_POOLS_COMP_TYPE
Add location of neuron when pip installed on Binder
@pgleeson pgleeson merged commit b43594b into master Aug 20, 2024
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2 participants