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python312Packages.nutpie: init at 0.13.2
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GaetanLepage committed Oct 26, 2024
1 parent 6090030 commit 869c766
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98 changes: 98 additions & 0 deletions pkgs/development/python-modules/nutpie/default.nix
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{
lib,
stdenv,
buildPythonPackage,
fetchFromGitHub,
rustPlatform,

# build-system
cargo,
rustc,

# buildInputs
libiconv,

# dependencies
arviz,
pandas,
pyarrow,
xarray,

# tests
# bridgestan, (not packaged)
jax,
jaxlib,
numba,
pymc,
pytestCheckHook,
setuptools,
}:

buildPythonPackage rec {
pname = "nutpie";
version = "0.13.2";
pyproject = true;

src = fetchFromGitHub {
owner = "pymc-devs";
repo = "nutpie";
rev = "refs/tags/v${version}";
hash = "sha256-XyUMCnHm5V7oFaf3W+nGpcHfq1ZFppeGMIMCU5OB87s=";
};

cargoDeps = rustPlatform.fetchCargoTarball {
inherit src;
name = "${pname}-${version}";
hash = "sha256-9lM1S42Bmnlb0opstZN2aOKYhBnP87Frq+fQxk0ez+c=";
};

build-system = [
cargo
rustPlatform.bindgenHook
rustPlatform.cargoSetupHook
rustPlatform.maturinBuildHook
rustc
];

buildInputs = lib.optionals stdenv.hostPlatform.isDarwin [
libiconv
];

dependencies = [
arviz
pandas
pyarrow
xarray
];

pythonImportsCheck = [ "nutpie" ];

nativeCheckInputs = [
# bridgestan
numba
jax
jaxlib
pymc
pytestCheckHook
setuptools
];

disabledTestPaths = [
# Require unpackaged bridgestan
"tests/test_stan.py"

# KeyError: "duplicate registration for <class 'numba.core.types.misc.SliceType'>"
"tests/test_pymc.py"
];

# Currently, no test are working...
doCheck = false;

meta = {
description = "Python wrapper for nuts-rs";
homepage = "https://github.com/pymc-devs/nutpie";
changelog = "https://github.com/pymc-devs/nutpie/blob/${src.rev}/CHANGELOG.md";
license = lib.licenses.mit;
maintainers = with lib.maintainers; [ GaetanLepage ];
};
}
2 changes: 2 additions & 0 deletions pkgs/top-level/python-packages.nix
Original file line number Diff line number Diff line change
Expand Up @@ -9143,6 +9143,8 @@ self: super: with self; {

nutils-poly = callPackage ../development/python-modules/nutils-poly { };

nutpie = callPackage ../development/python-modules/nutpie { };

nvchecker = callPackage ../development/python-modules/nvchecker { };

nvdlib = callPackage ../development/python-modules/nvdlib { };
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