From a0865a0c7d7586f0aa362b5729d62742f03e66e4 Mon Sep 17 00:00:00 2001 From: Christoph Beger Date: Wed, 3 Jul 2024 10:32:04 +0200 Subject: [PATCH] Update iris --- cop.owl | 362 ++++++++++++++++++++++++++++---------------------------- 1 file changed, 181 insertions(+), 181 deletions(-) diff --git a/cop.owl b/cop.owl index a380d4d..0d4f83b 100644 --- a/cop.owl +++ b/cop.owl @@ -1,8 +1,8 @@ - - + + 2024-06-11 2020-01-20 - https://purl.org/ontology/cop/ + https://w3id.org/cop/ cop Core Ontology of Phenotyping (COP) Core Ontology of Phenotyping @@ -81,9 +82,9 @@ - + - + @@ -98,166 +99,166 @@ - + - - - + + + - + - - - - + + + + - + - - - + + + - + - - - - + + + + - + - - - - + + + + - + - - - - + + + + - + - + - + - + - + - - - - + + + + - + - + - - + + - + - - + + - + - + - - + + - + - + - + - + - + - + - + - + - - + + - + - - - + + + - + - - - + + + @@ -312,10 +313,10 @@ - + - + @@ -328,7 +329,7 @@ - + A representation of something, often idealized or modified to make it conceptually easier to understand. Model @@ -338,16 +339,16 @@ - + - + - + @@ -360,11 +361,11 @@ - + - - + + An identifying designation. @@ -376,11 +377,11 @@ - + - - + + A symbol or combination of symbols which is assigned to the members of a collection. @@ -392,11 +393,11 @@ - + - - + + A written or verbal account, representation, statement, or explanation of something. @@ -408,11 +409,11 @@ - + - - + + A named quantity in terms of which other quantities are measured or specified, used as a standard measurement of like kinds. @@ -424,11 +425,11 @@ - + - - + + The difference between the lowest and highest numerical values; the limits or scale of variation. @@ -440,11 +441,11 @@ - + - - + + An indication of the form that a value will have. Examples include string, integer, and character. @@ -486,11 +487,11 @@ - + - - + + A word having the same or nearly the same meaning as another word or other words in a language; a word or an expression that serves as a figurative or symbolic substitute for another. @@ -512,11 +513,11 @@ - + - - + + A character string containing a formal language expression that specifies how attributes are, should be, or have been derived from input parameters associated with activity. @@ -531,8 +532,8 @@ - - + + Organism @@ -540,19 +541,19 @@ - + - - + + - + - + 1 @@ -565,15 +566,15 @@ - + - - + + - + 1 - + A basic phenotype restriction is a restriction of a basic phenotype class. @@ -584,19 +585,19 @@ - + - - + + - - + + - + 1 @@ -609,15 +610,15 @@ - + - - + + - + 1 - + A derived phenotype restriction is a restriction of a derived phenotype class. @@ -628,10 +629,10 @@ - + - - + + A dynamic phenotype algorithm is a clear specification of instructions for executing an arbitrary phenotype query. Ein dynamischer Phänotyp-Algorithmus ist eine klare Spezifikation von Anweisungen für die Ausführung einer beliebigen Phänotyp-Abfrage. Dynamic phenotype algorithm @@ -640,19 +641,19 @@ - + - + - + - + 1 @@ -663,7 +664,7 @@ Phänotyp - + A phenotype is a (combination of) bodily feature(s) or observable characteristic(s)/trait(s) of an organism. Mahner M, Kary M. What Exactly Are Genomes, Genotypes and Phenotypes? And What About Phenomes? J Theor Biol 1997;186:55–63. https://doi.org/10.1006/jtbi.1996.0335. @@ -672,20 +673,20 @@ - + - + - - + + - - + + A phenotype algorithm is a clear specification of instructions for executing a phenotype query, i.e., identifying individuals matching the query criteria (i.e., meeting all the inclusion but none of the exclusion criteria) and deriving/outputting further phenotypes (projection entries). @@ -696,20 +697,20 @@ - + - + - + - + Phenotype classes are categories whose instances are phenotypes. @@ -720,14 +721,14 @@ - + - + - - + + A phenotype model is a formal representation of delimited phenotypic knowledge (i.e., phenotype classes, their attributes, and relationships). @@ -738,24 +739,24 @@ - + - + - - + + - - + + - - + + @@ -768,22 +769,22 @@ - + - - + + - + 1 - + 1 - + A phenotype class whose extension (the set of instances, i.e., phenotypes) is restricted to a certain value range is called phenotype restriction. @@ -794,9 +795,9 @@ - + - + Phenotyping is a process of identifying or classifiyng phenotypes. This includes the identifying of individuals with certain phenotypes, determining phenotypes of individuals and deriving further phenotypes. Die Phänotypisierung ist ein Prozess der Identifizierung oder Klassifizierung von Phänotypen. Dazu gehören die Identifizierung von Personen mit bestimmten Phänotypen, die Bestimmung von Phänotypen von Personen und die Ableitung weiterer Phänotypen. @@ -806,20 +807,20 @@ - + - + - - + + - - + + Phenotyping software is a software implementing a phenotype algorithm. A run of the software (implemented phenotype algorithm) realises a phenotyping process. @@ -830,9 +831,9 @@ - + - + Representation entity is a model, specification or description. Eine Darstellungseinheit ist ein Modell, eine Spezifikation oder eine Beschreibung. Representation entity @@ -841,15 +842,15 @@ - + - - + + - + 1 - + A static phenotype algorithm is a clear specification of instructions for executing exactly one specific phenotype query. @@ -860,10 +861,10 @@ - + - - + + A phenotype class whose extension (the set of instances, i.e., phenotypes) is not restricted to a certain value range is called unrestricted phenotype class. Eine Phänotypklasse, deren Erweiterung (die Menge der Instanzen, d.h. der Phänotypen) nicht auf einen bestimmten Wertebereich beschränkt ist, wird als uneingeschränkte Phänotypklasse bezeichnet. Unrestricted phenotype class @@ -958,4 +959,3 @@ -