From 0f4349817de762304db3db4fd0e551047fb1c512 Mon Sep 17 00:00:00 2001
From: Chris Harris <cjh@lbl.gov>
Date: Fri, 13 Sep 2024 13:22:34 +0000
Subject: [PATCH] Add CIBW_BEFORE_ALL_MACOS to build HDF5

The brew installed version has a too new min os version
---
 .github/scripts/install.sh            |  2 +-
 .github/scripts/install_hdf5_macos.sh | 13 +++++++++++++
 .github/workflows/build_wheels.yml    |  6 +++++-
 3 files changed, 19 insertions(+), 2 deletions(-)
 create mode 100644 .github/scripts/install_hdf5_macos.sh

diff --git a/.github/scripts/install.sh b/.github/scripts/install.sh
index 1c2944b9..bed4f25a 100644
--- a/.github/scripts/install.sh
+++ b/.github/scripts/install.sh
@@ -6,5 +6,5 @@ pip install cibuildwheel
 if [[ $RUNNER_OS == "Windows" ]]; then
     git clone --recursive -b 3.3.9 --depth 1 https://gitlab.com/libeigen/eigen /c/eigen
 elif [[ $RUNNER_OS == "macOS" ]]; then
-    brew install eigen hdf5 ninja
+    brew install eigen ninja
 fi
diff --git a/.github/scripts/install_hdf5_macos.sh b/.github/scripts/install_hdf5_macos.sh
new file mode 100644
index 00000000..5c4dd056
--- /dev/null
+++ b/.github/scripts/install_hdf5_macos.sh
@@ -0,0 +1,13 @@
+#!/usr/bin/env bash
+set -ev
+
+VERSION="1.14.4-3"
+NAME="hdf5-$VERSION"
+TARBALL="$NAME.tar.gz"
+wget https://github.com/HDFGroup/hdf5/releases/download/hdf5_1.14.4.3/$TARBALL
+tar -xzf $TARBALL
+mkdir build
+cd build
+cmake -GNinja ../$NAME -DHDF5_ENABLE_SZIP_ENCODING:BOOL=OFF -DBUILD_TESTING:BOOL=OFF
+ninja
+sudo ninja install
diff --git a/.github/workflows/build_wheels.yml b/.github/workflows/build_wheels.yml
index dd6e66b0..6b25192b 100644
--- a/.github/workflows/build_wheels.yml
+++ b/.github/workflows/build_wheels.yml
@@ -24,7 +24,9 @@ env:
     USE_PYTHON_IN_PATH=1
 
   # Get cmake to use python in the path...
-  CIBW_ENVIRONMENT_MACOS: USE_PYTHON_IN_PATH=1
+  CIBW_ENVIRONMENT_MACOS: >
+    EXTRA_CMAKE_ARGS="-DHDF5_DIR=/usr/local/HDF_Group/HDF5/1.14.4/cmake "
+    USE_PYTHON_IN_PATH=1
 
   CIBW_BEFORE_TEST: pip install -r {project}/tests/requirements.txt
 
@@ -32,6 +34,8 @@ env:
 
   CIBW_ARCHS_MACOS: x86_64 arm64
 
+  CIBW_BEFORE_ALL_MACOS: . .github/scripts/install_hdf5_macos.sh
+
 # Use bash by default for the run command
 defaults:
   run: