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Test AHFE user charges #586

Merged
merged 6 commits into from
Oct 25, 2023
Merged

Test AHFE user charges #586

merged 6 commits into from
Oct 25, 2023

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IAlibay
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@IAlibay IAlibay commented Oct 25, 2023

Fixes #578

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@pep8speaks
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pep8speaks commented Oct 25, 2023

Hello @IAlibay! Thanks for updating this PR. We checked the lines you've touched for PEP 8 issues, and found:

Line 328:80: E501 line too long (85 > 79 characters)

Comment last updated at 2023-10-25 10:54:16 UTC

Comment on lines 338 to 340
system_generator.create_system(
mol.to_topology().to_openmm(), molecules=[mol]
)
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@richardjgowers this is the identation bug I mentioned earlier - I should have noticed 🤦🏽‍♂️

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no this won't work... one sec

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codecov bot commented Oct 25, 2023

Codecov Report

All modified and coverable lines are covered by tests ✅

Comparison is base (058db74) 92.03% compared to head (f19ea3c) 92.08%.
Report is 1 commits behind head on main.

Additional details and impacted files
@@            Coverage Diff             @@
##             main     #586      +/-   ##
==========================================
+ Coverage   92.03%   92.08%   +0.05%     
==========================================
  Files         123      123              
  Lines        8157     8196      +39     
==========================================
+ Hits         7507     7547      +40     
+ Misses        650      649       -1     
Files Coverage Δ
openfe/protocols/openmm_afe/base.py 94.81% <100.00%> (+0.48%) ⬆️
...ts/protocols/test_openmm_afe_solvation_protocol.py 100.00% <100.00%> (ø)
...tests/protocols/test_openmm_equil_rfe_protocols.py 90.45% <100.00%> (-0.04%) ⬇️

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@richardjgowers richardjgowers merged commit 67ac1ec into main Oct 25, 2023
8 checks passed
@richardjgowers richardjgowers deleted the ahfe_user_charges branch October 25, 2023 12:11
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add test for AFE with user supplied partial charges
3 participants