Merge pull request #2940 from effigies/enh/annex-phenotype-data

feat(dataset): Annex TSV files in phenotype directory
OpenNeuroOrg · Nov 19, 2023 · d239e8d · d239e8d
2 parents 601f3bb + 6b333c8
commit d239e8d
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Showing 3 changed files with 10 additions and 4 deletions.
diff --git a/docs/git.md b/docs/git.md
@@ -18,14 +18,18 @@ OpenNeuro validates the size of regular git (non-annexed) files and a subset of
 A recommended `.gitattributes` configuration for git-annex to automate annexing the correct files when using `git add` or `datalad save`
 
 ```
-* annex.largefiles=largerthan=1mb
+* annex.backend=SHA256E
+**/.git* annex.largefiles=nothing
 *.bval annex.largefiles=nothing
 *.bvec annex.largefiles=nothing
-*.json annex.largefiles=nothing
-*.tsv annex.largefiles=nothing
+*.json annex.largefiles=largerthan=1mb
+phenotype/*.tsv annex.largefiles=anything
+*.tsv annex.largefiles=largerthan=1mb
+dataset_description.json annex.largefiles=nothing
 .bidsignore annex.largefiles=nothing
 CHANGES annex.largefiles=nothing
-README annex.largefiles=nothing
+README* annex.largefiles=nothing
+LICENSE annex.largefiles=nothing
 ```
 
 ## Credential Helper

diff --git a/services/datalad/datalad_service/tasks/dataset.py b/services/datalad/datalad_service/tasks/dataset.py
@@ -18,6 +18,7 @@
 *.bval annex.largefiles=nothing
 *.bvec annex.largefiles=nothing
 *.json annex.largefiles=largerthan=1mb
+phenotype/*.tsv annex.largefiles=anything
 *.tsv annex.largefiles=largerthan=1mb
 dataset_description.json annex.largefiles=nothing
 .bidsignore annex.largefiles=nothing

diff --git a/services/datalad/hooks/pre-receive b/services/datalad/hooks/pre-receive
@@ -20,6 +20,7 @@ readonly GIT_ATTRIBUTES="* annex.backend=SHA256E
 *.bval annex.largefiles=nothing
 *.bvec annex.largefiles=nothing
 *.json annex.largefiles=largerthan=1mb
+phenotype/*.tsv annex.largefiles=anything
 *.tsv annex.largefiles=largerthan=1mb
 dataset_description.json annex.largefiles=nothing
 .bidsignore annex.largefiles=nothing