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feat(dataset): Annex TSV files in phenotype directory #2940

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Nov 19, 2023
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feat(dataset): Annex TSV files in phenotype directory #2940

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12 changes: 8 additions & 4 deletions docs/git.md
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Original file line number Diff line number Diff line change
Expand Up @@ -18,14 +18,18 @@ OpenNeuro validates the size of regular git (non-annexed) files and a subset of
A recommended `.gitattributes` configuration for git-annex to automate annexing the correct files when using `git add` or `datalad save`

```
* annex.largefiles=largerthan=1mb
* annex.backend=SHA256E
**/.git* annex.largefiles=nothing
*.bval annex.largefiles=nothing
*.bvec annex.largefiles=nothing
*.json annex.largefiles=nothing
*.tsv annex.largefiles=nothing
*.json annex.largefiles=largerthan=1mb
phenotype/*.tsv annex.largefiles=anything
*.tsv annex.largefiles=largerthan=1mb
dataset_description.json annex.largefiles=nothing
.bidsignore annex.largefiles=nothing
CHANGES annex.largefiles=nothing
README annex.largefiles=nothing
README* annex.largefiles=nothing
LICENSE annex.largefiles=nothing
```

## Credential Helper
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1 change: 1 addition & 0 deletions services/datalad/datalad_service/tasks/dataset.py
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Expand Up @@ -18,6 +18,7 @@
*.bval annex.largefiles=nothing
*.bvec annex.largefiles=nothing
*.json annex.largefiles=largerthan=1mb
phenotype/*.tsv annex.largefiles=anything
*.tsv annex.largefiles=largerthan=1mb
dataset_description.json annex.largefiles=nothing
.bidsignore annex.largefiles=nothing
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1 change: 1 addition & 0 deletions services/datalad/hooks/pre-receive
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Expand Up @@ -20,6 +20,7 @@ readonly GIT_ATTRIBUTES="* annex.backend=SHA256E
*.bval annex.largefiles=nothing
*.bvec annex.largefiles=nothing
*.json annex.largefiles=largerthan=1mb
phenotype/*.tsv annex.largefiles=anything
*.tsv annex.largefiles=largerthan=1mb
dataset_description.json annex.largefiles=nothing
.bidsignore annex.largefiles=nothing
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